PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022991917.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 270aa MW: 30934.2 Da PI: 9.3035

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022991917.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.2	5.2e-15	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++ G g+W+ Iar g+ R++k+c++rw +yl XP_022991917.1 16 KGLWSPEEDEKLMRYMLSNGQGCWTDIARNAGLLRCGKSCRLRWINYL 63 678***************************99**********97 PP
2	Myb_DNA-binding	45.1	2.4e-14	69	112	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+ l+++++ +lG++ W+ Ia++++ gRt++++k+ w++ XP_022991917.1 69 RGAFSPQEERLILHLHSLLGNR-WSQIAARLP-GRTDNEIKNLWNS 112 89******************.*****.*******9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence
MRKPDSAAAA NIRLKKGLWS PEEDEKLMRY MLSNGQGCWT DIARNAGLLR CGKSCRLRWI 60 NYLRPDLKRG AFSPQEERLI LHLHSLLGNR WSQIAARLPG RTDNEIKNLW NSSLKKRLKS 120 HNNISSPNPR ESSEPRSSNN FGELTENIIP IHEHNNIMNM CMESSSFSSS SSSTSMSTPS 180 MFLQNYIPCD PFRTLLDNDQ YIMVGGAMEE GYYGDYSQRI FEPKGLVRDN YDFSHLPPLG 240 NGDIIEEIKV RVGIKAVISH LAYDFKRRKY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	114	120	LKKRLKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12870.1	2e-68	MYB family protein