PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022991916.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 316aa MW: 36212.6 Da PI: 5.1225 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46.8 | 6.7e-15 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++ G g+W+ Iar g+ R++k+c++rw +yl XP_022991916.1 16 KGLWSPEEDEKLMRYMLSNGQGCWTDIARNAGLLRCGKSCRLRWINYL 63 678*****************************99************97 PP | |||||||
2 | Myb_DNA-binding | 44.7 | 3e-14 | 69 | 112 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+ l+++++ +lG++ W+ Ia++++ gRt++++k+ w++ XP_022991916.1 69 RGAFSPQEERLILHLHSLLGNR-WSQIAARLP-GRTDNEIKNLWNS 112 89********************.*********.*********9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 316 aa Download sequence |
MRKPDSAAAA NIRLKKGLWS PEEDEKLMRY MLSNGQGCWT DIARNAGLLR CGKSCRLRWI 60 NYLRPDLKRG AFSPQEERLI LHLHSLLGNR WSQIAARLPG RTDNEIKNLW NSSLKKRLKS 120 HNNISSPNPR ESSEPRSSNN FGELTENIIP IHEHNNIMNM CMESSSFSSS SSSTSMSTPS 180 MFLQNYIPCD PFRTLLDNDQ YIMVGGAMEE GYYGDYSQRI FEPKGLVRDN YDFSHLPPLG 240 NGDIIEEIKV PSINIKENIE NNIEEFNNDC FDYNNEMSFK VEGIFGNNYQ TELQENSNSK 300 IGGWDLEGFI LDFQID |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 114 | 120 | LKKRLKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12870.1 | 5e-68 | MYB family protein |