PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022991907.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | AP2 | ||||||||
Protein Properties | Length: 361aa MW: 40753.9 Da PI: 6.7907 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.6 | 4.9e-16 | 49 | 108 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++ g k+ ++++lg ++ +e Aa a++ a++k++g XP_022991907.1 49 SVYRGVTRHRWTGRYEAHLWDkNCWnEGqnKKgRQVYLGAYDDEEAAAHAYDLAALKYWG 108 78*******************999963367556*************************98 PP | |||||||
2 | AP2 | 51.2 | 3.1e-16 | 151 | 202 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g XP_022991907.1 151 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 202 89****99**********99966...3.6*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 361 aa Download sequence |
MAKISHPPHK NSISTTANSQ SSPLHHSQKK VLKRTRKSTP RDSPAQRSSV YRGVTRHRWT 60 GRYEAHLWDK NCWNEGQNKK GRQVYLGAYD DEEAAAHAYD LAALKYWGTE TVLNFPLLTY 120 QDEIKEMEGQ SREEYIGYLR RKSSGFSRGV SKYRGVARHH HNGRWEARIG RVFGNKYLYL 180 GTYATQEEAA TAYDMAAIEY RGLNAVTNFD LSRYIKCLRP EEQDIPNNNN CPPSPNAGKT 240 TSELDPKSLL EFTFPSQCSS SDQPISTPPL GPGDGESSSS NTLELLLHSS KFNDIIERNP 300 TADPPQTPPE SDRPRRCIPD DIQTYFDCTQ DSDDIAEGDD GIFGYLNSFL PSSNFHYALD 360 A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G16060.1 | 1e-99 | AP2 family protein |