PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022991901.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C3H | ||||||||
Protein Properties | Length: 359aa MW: 40226.5 Da PI: 7.876 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 18.7 | 3.2e-06 | 3 | 26 | 2 | 26 |
-S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHg 26 k++lC++f+ G C G+ C F+H+ XP_022991901.1 3 KRVLCKYFSH-GACLKGEYCEFSHD 26 99****9999.*************5 PP | |||||||
2 | zf-CCCH | 25.3 | 2.7e-08 | 34 | 54 | 5 | 26 |
--SGGGGTS--TTTTT-SS-SS CS zf-CCCH 5 lCrffartGtCkyGdrCkFaHg 26 C ++++ G C +G+rC++ H+ XP_022991901.1 34 VCTYYQK-GRCAFGSRCRYDHV 54 6******.*************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 359 aa Download sequence |
MSKRVLCKYF SHGACLKGEY CEFSHDWSAP PSNVCTYYQK GRCAFGSRCR YDHVKVSQAE 60 SSASSNSEQP HVSESVSIAH PLLSRPLSPL AGSTSELAGS KISCPPSHVE IAWSGQSEHS 120 DGLDDWRTGV TRIVGPADIP ICSFAAAGSD CPRGQNCHHI HGDLCPTCGK HCLHPFRTYE 180 REEHIKACEK KQKHLESLKH SQDIECSVCL ERVLSKTEIA ERKFGLLSEC DHPFCISCIR 240 NWRNTSSTSG MNVNSALRAC PICRKLSYFV IPSVIWYSSK EEKQEIVDSY KSRLRSIDCK 300 HFNFGNGNCP FGSSCFYKHA HWDGRLEEIT LRHIGNQDGL TVIAKNIRLS EFLSDLHIR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G08505.1 | 1e-155 | C3H family protein |