PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022991793.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

LBD

Protein Properties

Length: 293aa MW: 33235.2 Da PI: 5.9535

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022991793.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	123.3	1.2e-38	31	129	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 aCaaCk++rrkCa+dC+lapyfp++++++f n+hklFG+sn++k++k+l++ e+e+am+++++++++r dPv G++++i++lq q+e k+el+ XP_022991793.1 31 ACAACKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVSNITKIIKNLDPFEKEEAMRTIIFQSDVRSMDPVGGCYRIIRDLQLQIEYIKTELD 125 7********************************************************************************************98 PP DUF260 96 llke 99 + + XP_022991793.1 126 FVLS 129 7765 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MSPITHHNHP HHHHQLSKPT ASTLASATTQ ACAACKYQRR KCAPDCILAP YFPHDRQRQF 60 LNAHKLFGVS NITKIIKNLD PFEKEEAMRT IIFQSDVRSM DPVGGCYRII RDLQLQIEYI 120 KTELDFVLSQ LALCKQQAAA AAAVAILEAD PMSGYGGLEH QFVEGYGGEG FVVGENENRE 180 TLEDQEVEVW GIQDSCSSLQ LKPAGSVQDF HDIKIDTNNT NHHHHHQQQQ QQQQHLLRFQ 240 QDHHDQDLVH QSEEAMLKMD NVMLKESDPI QQAQDQELKG AVDTLFTFPT CDP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13850.1	4e-47	LBD family protein