PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022991707.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 319aa    MW: 35408.7 Da    PI: 8.4866
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022991707.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.93.6e-1666111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg W + Ed +l ++v+ +G+ +W++Ia+++  gR++k+c++rw++ 
   XP_022991707.1  66 RGHWRPAEDTKLRELVAIYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 111
                      899*****************************.***********996 PP
2Myb_DNA-binding56.18.3e-18118161146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      r ++++eE+e+l +a++ +G++ W+ Iar ++ gRt++ +k++w+ 
   XP_022991707.1 118 RRAFSEEEEERLMQAHRIYGNK-WAMIARLFP-GRTDNAVKNHWHV 161
                      678*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MDLDLNSALM SISDFPFSCE SMMSRSSETD FSDGFVENHN ANPASCSNAN NNNTTPTGAQ  60
SRLCARGHWR PAEDTKLREL VAIYGPQNWN LIAEKLEGRS GKSCRLRWFN QLDPRINRRA  120
FSEEEEERLM QAHRIYGNKW AMIARLFPGR TDNAVKNHWH VIMARKYREH SRCYRRRKLT  180
QSVYTKMDQD LSFLKHHNIP NFQASIGAVD YAFLTQMPIA GAEAMPSDTP FFTSCAHLST  240
LNVLPDPKSR FWDGTGNGIL VPGSHSEYRA CNTAAAAAAN DGVGGSQVAA GGSSSSMMGE  300
ARKQSPRFID FLGVGATGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26780.12e-76MYB family protein