PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022991585.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | Trihelix | ||||||||
Protein Properties | Length: 329aa MW: 35996.5 Da PI: 5.5362 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 86.1 | 4.2e-27 | 17 | 111 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rWt+qe+l+Li++++ e+r+r g+ + +p+W++vs++++++g++r+p+qC+++w+nl++++kkike+e++ +++++s +++ ++l+ XP_022991585.1 17 RWTRQEILVLIQGKKVAETRVRGGRaaslafgsaQVEPKWASVSSYCKRHGVNRGPVQCRKRWSNLAGDFKKIKEWESQIREDTESFWVMRNDLR 111 8*********************76555666666699********************************************999999999999986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 329 aa Download sequence |
MSIDGGDDAT KTPRLPRWTR QEILVLIQGK KVAETRVRGG RAASLAFGSA QVEPKWASVS 60 SYCKRHGVNR GPVQCRKRWS NLAGDFKKIK EWESQIREDT ESFWVMRNDL RRERKLPGFF 120 DKEVYDILDS GPAPSPSPAL ALALAPAPPP ALNSDEVKPD AEPEHVFDSS KIATVDDGLF 180 SDFEQDETSR SPMKEVAGKE VPAPTADGAI PAPTPLSEKL YQPAAQDCPV QGTSNDREAA 240 AAANPGIGST SSQEGRKRKH VALDVDEETM VQNELIGILE KNGKLLSAQL EAQNMNFELD 300 REQRKHHADG LVAVLNKLAD ALGRIADKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33550.1 | 1e-113 | Trihelix family protein |