PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022991539.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 290aa    MW: 33156 Da    PI: 9.0924
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022991539.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding271.1e-082469346
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                     +WT+eE +++  a + + ++   +W ++a++++ g+t  +++  ++ 
   XP_022991539.1 24 KWTKEENKRFESALAIFDKEtpdRWFKVAAMIP-GKTVDDVIKQYRE 69
                     8*****************99*************.*******999986 PP
2Myb_DNA-binding42.12e-13119163347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++++  ++G+g+W+ I+r + + +t+ q+ s+ qky
   XP_022991539.1 119 PWTEEEHMKFLRGLLKYGKGDWRNISRNFVNSKTPTQVASHAQKY 163
                      8*****************************9*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MKTLYPSSHL SSSAWFLLHN PTTKWTKEEN KRFESALAIF DKETPDRWFK VAAMIPGKTV  60
DDVIKQYREL EEDVYEIEAG RFPIPGYDLA SSFSFQFVDG RRKSSVGRGS DHERKKGVPW  120
TEEEHMKFLR GLLKYGKGDW RNISRNFVNS KTPTQVASHA QKYFMRQLSG GKDKRRPSIH  180
DITTLNLTDT TASENQNLSS SMDQLSSLPS LQRSPCYQNL LFDWNQSTDT ELLGLGPNYG  240
DPLMSFSSGI AANGIKNEQD RELSSAYYGT YSNPHKSIFQ FESSRRQVYG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11280.12e-87MYB family protein