PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022991382.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CAMTA

Protein Properties

Length: 961aa MW: 107810 Da PI: 6.2392

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022991382.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	173.8	2.5e-54	13	127	3	116
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e ++rwlk+ e++ iL+n+ek++lt+e++++p+sgsl+L+n++++r+fr+DG++w+kk+dg+tv E+he+LKvg+ e+l+cyYah+e+np+fqr XP_022991382.1 13 REaQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDGHNWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQR 107 55599**************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhyle 116 r+yw+L+++ ++ivlvhy++ XP_022991382.1 108 RSYWMLDQSCDHIVLVHYRD 127 ****************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 961 aa Download sequence
MMNDGYDVRD LYREAQTRWL KPPEVLFILQ NHEKYQLTEE APKQPTSGSL FLFNKRVLRF 60 FRRDGHNWRK KRDGRTVGEA HERLKVGNAE ALNCYYAHGE HNPNFQRRSY WMLDQSCDHI 120 VLVHYRDISE GRSGAESVPQ LSPASASSSG SYPSQNHALE YQHLLSPGSV EVSSETGNRT 180 IASNGVDRQY EISELKSSND REVSQALRRI EEQLSLNEDS LKDIGPYYGH EEGSNFNLID 240 YYEMSIEDQF SVLQHPENAV HDNSYTSFEM QDASGKHYRY DMAHEFIFGG EGTRPLGDAL 300 GSSKTTVLES QDRHSLLWNE NENPSSSSTV DNEHRNWLDS GGKTFPMLGS CTSPEYASPL 360 DTHDDNSNYH LSFLKQDHGN SFEVDTSLIV AQVQKFTIRQ IVPEQGYATE STKVIIIGSF 420 LCDPSKAPWA CMFGDIEVPL QVVQNGVLCF EAPPHLPGKV AFFITSGNRE PCSEVREFEY 480 KMNVCSHCQS HSSGATKSPE ELLLLVRLVQ LLLSDSLMQK FDEVDSEVRS NNLKAGDDQW 540 SSLIEALLVG SETPSGTMDW LLQELLKDKL YLWLSSQKKD RHDLAGFSLS KKEQGVIHMI 600 SGLGYVWALN PILRCGVNIN FRDINGWTAL HWAARFGREK MVAALIASGA SAGAVTDPSS 660 QDRDGKTAAS IADIHGHKGL AGYLSEVALT SHLSSLTFEE GELSNGSAEI EAEITVNCIS 720 KGNLSSAEDC IPLKNTLAAV RNAAQAAARI QSAFRAHSFR KRQQKEATFA ACIDEYGIDP 780 NDIQGLLAMS KLNFSNRRDY NAAALSIQKK YRGWKGRREF LSMRQKVVKI QAHVRGYQAR 840 KHHKIICWAV GILDKAVLRW RRKGVGLRGF RSEIGSIDES EDGDIIKVFR KQKVEGTIDE 900 AVSRVLSMVD SPDARQQYHR MLEGFREAKA KLDGTGNESV ESTCFSDVSE MEDCNQYPKF 960 V

Sequence ? help Back to Top

Protein Sequence Length: 961 aa Download sequence

MMNDGYDVRD LYREAQTRWL KPPEVLFILQ NHEKYQLTEE APKQPTSGSL FLFNKRVLRF  60
FRRDGHNWRK KRDGRTVGEA HERLKVGNAE ALNCYYAHGE HNPNFQRRSY WMLDQSCDHI  120
VLVHYRDISE GRSGAESVPQ LSPASASSSG SYPSQNHALE YQHLLSPGSV EVSSETGNRT  180
IASNGVDRQY EISELKSSND REVSQALRRI EEQLSLNEDS LKDIGPYYGH EEGSNFNLID  240
YYEMSIEDQF SVLQHPENAV HDNSYTSFEM QDASGKHYRY DMAHEFIFGG EGTRPLGDAL  300
GSSKTTVLES QDRHSLLWNE NENPSSSSTV DNEHRNWLDS GGKTFPMLGS CTSPEYASPL  360
DTHDDNSNYH LSFLKQDHGN SFEVDTSLIV AQVQKFTIRQ IVPEQGYATE STKVIIIGSF  420
LCDPSKAPWA CMFGDIEVPL QVVQNGVLCF EAPPHLPGKV AFFITSGNRE PCSEVREFEY  480
KMNVCSHCQS HSSGATKSPE ELLLLVRLVQ LLLSDSLMQK FDEVDSEVRS NNLKAGDDQW  540
SSLIEALLVG SETPSGTMDW LLQELLKDKL YLWLSSQKKD RHDLAGFSLS KKEQGVIHMI  600
SGLGYVWALN PILRCGVNIN FRDINGWTAL HWAARFGREK MVAALIASGA SAGAVTDPSS  660
QDRDGKTAAS IADIHGHKGL AGYLSEVALT SHLSSLTFEE GELSNGSAEI EAEITVNCIS  720
KGNLSSAEDC IPLKNTLAAV RNAAQAAARI QSAFRAHSFR KRQQKEATFA ACIDEYGIDP  780
NDIQGLLAMS KLNFSNRRDY NAAALSIQKK YRGWKGRREF LSMRQKVVKI QAHVRGYQAR  840
KHHKIICWAV GILDKAVLRW RRKGVGLRGF RSEIGSIDES EDGDIIKVFR KQKVEGTIDE  900
AVSRVLSMVD SPDARQQYHR MLEGFREAKA KLDGTGNESV ESTCFSDVSE MEDCNQYPKF  960
V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	0.0	CAMTA family protein