PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022991377.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family AP2
Protein Properties Length: 336aa    MW: 37035.9 Da    PI: 9.0981
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022991377.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.23.6e-17133182155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  XP_022991377.1 133 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 182
                     78*******************......55************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MLNLNDLIIN CDETSTNRTV MEDSETSNSS VVNADEVCNS KDEDSSVLIF NILKRENSGG  60
GASPELVTQA LFPVAGGWGE TGSPVPKSHW LNLSSTGDFG REGVGGGTAE LKIVQQKQQQ  120
VRKSRRGPRS RSSQYRGVTF YRRTGRWESH IWDCGKQVYL GGFDTAHAAA RAYDRAAIKF  180
RGVNADINFN ISDYDEDMKQ LKNLSKEEFV HVLRRQSTGF SRGGSKLRGL SLQKYGRWET  240
QTSPIMAKNE IEQRSTMVDA NNGGNGHNLD LSIGGIFNYH LRNSSQNINI QTPKKENNGG  300
GGYGVGGQQP HIPSSMWSGF CSGFLADNQT NKNQTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.22e-60AP2 family protein