PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022991357.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | MIKC_MADS | ||||||||
Protein Properties | Length: 242aa MW: 27778.7 Da PI: 9.0166 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98.4 | 2.9e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s XP_022991357.1 9 KRIENKINRQVTFAKRRNGVLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 96.1 | 5.5e-32 | 85 | 174 | 10 | 99 |
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ea + s+qqe+ kLk+++e Lqr+qR+llGedL++Ls keL++Le+qL+ slk+iRs++++++l+q+ +lq+ke+ l+++n++L+++l XP_022991357.1 85 REALEVSSQQEYLKLKARYEALQRSQRNLLGEDLGPLSSKELESLERQLDMSLKHIRSTRTQYMLDQLTDLQRKEHLLNDANRTLKQRLV 174 45556789******************************************************************************9875 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 242 aa Download sequence |
MGRGRVELKR IENKINRQVT FAKRRNGVLK KAYELSVLCD AEVALIIFSN RGKLYEFCSS 60 SSMLKTLERY QKCNYGAPEP NVSTREALEV SSQQEYLKLK ARYEALQRSQ RNLLGEDLGP 120 LSSKELESLE RQLDMSLKHI RSTRTQYMLD QLTDLQRKEH LLNDANRTLK QRLVEGYQVN 180 ALQLNQSGDD MMYGRHQAHP PPDAFFHLLD AEPTLQIGYH PDPLTVVTAG PSMNNFLPGW 240 LP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G24260.1 | 1e-122 | MIKC_MADS family protein |