PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022991105.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C3H
Protein Properties Length: 293aa    MW: 32568.7 Da    PI: 7.2264
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022991105.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH40.25.8e-13227251226
                     -S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHg 26 
                     ktelC+ + ++G C+yG+ C+FaHg
  XP_022991105.1 227 KTELCKKWEESGGCPYGEHCRFAHG 251
                     8***********************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MEDDMCPPLP SSLSSTAEAS PNSPEPENLC SLHFVSMYHS IFPPLLSSSS LSFTPSPSSS  60
SSSSADDDFN NPCTATPTST TDDLLFQARL ILEHRELCQR HDLCLRRLRQ VTDDVDCLQR  120
ENAQLRLANA ELIKILSSKT AVDDLQSLIG GGQNGEEVGY EIISPTSVIR KYNSQFDGRN  180
NRRRTSLPKS ISVRSAAASA AAAPLNIQSR RVCGPVELEV YKQGMAKTEL CKKWEESGGC  240
PYGEHCRFAH GVEELRPVIR HPRYKTQICR MVLSGEKCCY GHRCHFRHSL THQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66810.13e-56C3H family protein