PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022991029.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 395aa MW: 44340.5 Da PI: 5.1863

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022991029.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	94.5	1.7e-29	57	199	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee....vikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tk 79 lp+G++F+Ptdee++ ++L++k++ +l+l+ +i+++d i++++P++Lp v+++ ++ +fF+k++++yatg+rk+r+ ++ XP_022991029.1 57 LPAGVKFDPTDEEIM-DHLAAKCAVGNLKLHAlideFIPTLDtdqgICYTHPENLP-GVSKDGNDAHFFHKTSNAYATGQRKRRKiesedcssME 149 799********99.99999995554433333444444455******.6677889****************86777766655 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+k+v++ kg + g kk++ +y ++ +k+e+++Wv+h+y+l XP_022991029.1 150 HFRWHKTGKTKAVIE-KGVHRGWKKIFSLYrsSKGGSKPERSSWVIHQYHL 199 778********.9999******4423456777*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MNMARAWILD SRTFARKVRN ISQSSSQVIK DCDAKRECPN CRFIIDNTDV SPEWPGLPAG 60 VKFDPTDEEI MDHLAAKCAV GNLKLHALID EFIPTLDTDQ GICYTHPENL PGVSKDGNDA 120 HFFHKTSNAY ATGQRKRRKI ESEDCSSMEH FRWHKTGKTK AVIEKGVHRG WKKIFSLYRS 180 SKGGSKPERS SWVIHQYHLG VEEDEKEGEY VLSKISYQQP KQCSKSNDNM LIEDFDALLH 240 QTSPRTPKSN PPIPPRSGKS FVSNDVADNG LPQSFAKEEE LTPEAAHISL ENNVGFPGWL 300 AGESQGIDDA ELHYLEDHLL CNEVLDSNVL TSNSQLTQMS FPLPGSNGCH NIMNDNVTCG 360 IADLENLELD TPPDFHLADL QFGSQESIFD WLDRI

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MNMARAWILD SRTFARKVRN ISQSSSQVIK DCDAKRECPN CRFIIDNTDV SPEWPGLPAG  60
VKFDPTDEEI MDHLAAKCAV GNLKLHALID EFIPTLDTDQ GICYTHPENL PGVSKDGNDA  120
HFFHKTSNAY ATGQRKRRKI ESEDCSSMEH FRWHKTGKTK AVIEKGVHRG WKKIFSLYRS  180
SKGGSKPERS SWVIHQYHLG VEEDEKEGEY VLSKISYQQP KQCSKSNDNM LIEDFDALLH  240
QTSPRTPKSN PPIPPRSGKS FVSNDVADNG LPQSFAKEEE LTPEAAHISL ENNVGFPGWL  300
AGESQGIDDA ELHYLEDHLL CNEVLDSNVL TSNSQLTQMS FPLPGSNGCH NIMNDNVTCG  360
IADLENLELD TPPDFHLADL QFGSQESIFD WLDRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	7e-92	NAC family protein