PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022990620.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | ERF | ||||||||
Protein Properties | Length: 222aa MW: 24278.8 Da PI: 5.0072 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.1 | 4.6e-18 | 24 | 72 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + GVr+++ +gr++AeIrdps+ + r++lg+f+taeeAa a++ a+++l+g XP_022990620.1 24 FLGVRRRP-WGRYAAEIRDPST---KERHWLGTFDTAEEAAVAYDCAARSLRG 72 67******.**********965...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MSPSPSKPKR KQQQPPPETT SHRFLGVRRR PWGRYAAEIR DPSTKERHWL GTFDTAEEAA 60 VAYDCAARSL RGSLARTNFL YSDSLPPPPP PPSAALPPNQ APLLLPTPPP HFHQIPPSRD 120 SPPSLFSVDG DGGAELPPFP PAISSESENY NYNYNYNQGL MELQNSGFEY FDQSSTEIGS 180 CFGFDSSSEY VHGPIFSSMP AVSDAGAGDF PSPAANFYFP QS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13910.1 | 1e-28 | ERF family protein |