PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022990453.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 234aa MW: 26468.7 Da PI: 7.1852

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022990453.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.9	4.1e-07	19	62	3	44
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 WT Ed+l+ +a + + +W ++a ++ g+ + ++k+++ XP_022990453.1 19 QWTRSEDKLFEEALVVVPADlpdRWQRVADLVP-GKLPREVKDHY 62 6****************9*********.********9 PP
2	Myb_DNA-binding	44.4	3.8e-14	118	162	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + k++G+g+W++I+r + +Rt+ q+ s+ qky XP_022990453.1 118 PWTEEEHRLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKY 162 8***************************99**********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 234 aa Download sequence
MVVMFHDSRW TTMTQSSTQW TRSEDKLFEE ALVVVPADLP DRWQRVADLV PGKLPREVKD 60 HYEALVYDVL EIDSGRVELP SYSDESAVGS PEWDSSGQIS FGSKAKPGGD SERKKGTPWT 120 EEEHRLFLLG LKKFGKGDWR SISRNVVITR TPTQVASHAQ KYFLRQNSGK KERKRSSIHD 180 ITTVDSNSAP IPFDPNWISP VPNPIIQSSM QQQLSPTGHL QDQGGALQTY RFPM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	1e-67	MYB family protein