PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022990250.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HSF

Protein Properties

Length: 375aa MW: 43557.2 Da PI: 4.6775

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022990250.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	99.7	2.8e-31	16	107	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 F+kklye+++de+++++i ws + +sf ++d ++f ++LpkyFkhsnf+SF+RQLn+YgF+k++++ w F+ + F kg+k+ll++ XP_022990250.1 16 FVKKLYEMVDDEATNSIIAWSPTDDSFRIVDITQFCVHMLPKYFKHSNFSSFMRQLNIYGFRKIDTDC---------WVFATDGFIKGQKHLLKN 101 9******************999************************************9987.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i r+k+ XP_022990250.1 102 IYRRKN 107 **97 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MVKSAAERQG STVAPFVKKL YEMVDDEATN SIIAWSPTDD SFRIVDITQF CVHMLPKYFK 60 HSNFSSFMRQ LNIYGFRKID TDCWVFATDG FIKGQKHLLK NIYRRKNIQG TDQHNAAQPQ 120 DKSEGQVELH DYTELWKEVE SLKIDKNSVM QELVKLKQHQ ETSEDKLLVL RDRLQGVEKN 180 QQQMLSFLVM AVQSPGFLVQ FLQPKEKNWR MADTSNMLEQ IPDDKQVPSN GMIVRYHQRP 240 LDELPANLLP AVSGMGKQQE SDPFPDGMKD FFLNSDFMKV LMDEKLCLDN HTQFVLPDVQ 300 DVAWEQLLLA SPFSGNSDNA TKIDHEKRSV DNEDDELDME TIDTRTHEEK SQDFEILIRQ 360 MECETFEMSQ RLDES

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MVKSAAERQG STVAPFVKKL YEMVDDEATN SIIAWSPTDD SFRIVDITQF CVHMLPKYFK  60
HSNFSSFMRQ LNIYGFRKID TDCWVFATDG FIKGQKHLLK NIYRRKNIQG TDQHNAAQPQ  120
DKSEGQVELH DYTELWKEVE SLKIDKNSVM QELVKLKQHQ ETSEDKLLVL RDRLQGVEKN  180
QQQMLSFLVM AVQSPGFLVQ FLQPKEKNWR MADTSNMLEQ IPDDKQVPSN GMIVRYHQRP  240
LDELPANLLP AVSGMGKQQE SDPFPDGMKD FFLNSDFMKV LMDEKLCLDN HTQFVLPDVQ  300
DVAWEQLLLA SPFSGNSDNA TKIDHEKRSV DNEDDELDME TIDTRTHEEK SQDFEILIRQ  360
MECETFEMSQ RLDES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67970.1	6e-93	HSF family protein