PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022990202.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 1381aa MW: 151766 Da PI: 7.7523

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022990202.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.8	1.2e-08	973	1014	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 WT E l+++av+ +G++ ++ I+ ++g ++ qck ++ k XP_022990202.1 973 YWTDGEKSLFIEAVTVYGKN-FSMISTHVG-SKSMDQCKVFFCK 1014 5***************99.*****.******88876 PP

Sequence ? help Back to Top
Protein Sequence Length: 1381 aa Download sequence
MPPEPLPWDR KDFFKERKHE RSEFLGPVPR WRDSSSHGSR EFSRWGSGDF RRPPGHGRQG 60 GWHVFSDDYG HGYGPSMSFN NKILENVSSR PSISHGHGKY ARNSRESRSF SQRDWKSHTW 120 ATSNGSTNSG GRLQHDLNYD QRSVHDMLIY PSHSHSDFVN PRDKVKGQHD KIDDFNGLGT 180 NQRRDRDYSV SSSGWKPLKW TRSGGLSSRT STSGHSSSTK GIDALDSNET KSETVLQNAS 240 QNLSPSADHA ECARSSLPCD EANAKKKPRL GWGEGLAKYE KKKVEIPDGS VITIVNAEAT 300 QSLNSSLIDK GPRGSGFFDC TSPATPSSVI CGSSPGGDEK SSGKASSDND VNNFGSPGSG 360 FQNQYEGSPA SNLEKLDRFS IPNLGSPLSQ LLQSTDSTSV DSRVVSFTAL SKLLAYKKEI 420 SKVLEMTETE IDLLENELKG LRSGSKGYFS SIPLASISLP VGDKCFEEHN NVTDMIPPVA 480 TLPVVTSTNN NSITMPHSTS DSEEVHADVK ENDQSDAKES VIMKEKLTLT GCSVEDNVVA 540 SVDNNMLIKS EGLALEPISS DIYEYADEGG DNVFDLILAS NKKSAREASE ALIRLLPANE 600 QKIDIWSTNA CSQNQCSMKE RFAKRKKLLR FKERVIALKF RAYQSLWKES LHVPPVRNLR 660 TKSQKKYQLS LWTNYSAYQK NRSSIRFRMP SPGNLNPVSN TEIQKHVSKQ LSNPQTKQYR 720 KTLKMPTLIL DKKDKMASRF ISNNGLVEDP CAVEKERMMI NPWTSEEKDV FMEKLEYFGK 780 DFGKIASFLD HKTTADCIEF YYKNHKSDCF EKTKKLEFGK KAKSSTGNYL ITTGKKWNPE 840 TNAASLDILG AASAMTACAH KYSSSRLGGR TACYTTQFDD NLSERAKSFH SFGNEREKVA 900 ADVLAGICGS LSSEAMGSSC ITGNFHRRDG SQDLKCKKGA TTILRRRMTA NLLQSVDDEV 960 CSDESCGEMD PSYWTDGEKS LFIEAVTVYG KNFSMISTHV GSKSMDQCKV FFCKARKCLG 1020 LDLICSAKKM PANGGDCNAN GFPCEAGVDR NAFPCEGVGN GGELESMNPQ STCQEVKEIN 1080 SHSNTAVDAM VSDACHRKDT SHSALDEDCQ SVNSANDKNR LLHNHAVVSD ETAKEQGNSS 1140 RVTVSVGNGL DAETKRGNID TSTGQGAKAS AHTADSSSAS LNSHVTSVPK DEQGRLHVRV 1200 RSRSLSDSEQ LSINGDVKLF GQILTHSSSV PSSSSNGNRT QHKFKRRLKA SSHGNLSTAK 1260 FSRKSSSGQE DVPSRSYGIW DGTQLRKGLS SLPDPTTLLS RYPTFDNFSK STSPIEQQQQ 1320 QQQPILNEQK SNCDSQMSEV NSSKVAQEVV GGIIVGEICN DDDDDALDTK LHCNKAEDGG 1380 S

Sequence ? help Back to Top

Protein Sequence Length: 1381 aa Download sequence

MPPEPLPWDR KDFFKERKHE RSEFLGPVPR WRDSSSHGSR EFSRWGSGDF RRPPGHGRQG  60
GWHVFSDDYG HGYGPSMSFN NKILENVSSR PSISHGHGKY ARNSRESRSF SQRDWKSHTW  120
ATSNGSTNSG GRLQHDLNYD QRSVHDMLIY PSHSHSDFVN PRDKVKGQHD KIDDFNGLGT  180
NQRRDRDYSV SSSGWKPLKW TRSGGLSSRT STSGHSSSTK GIDALDSNET KSETVLQNAS  240
QNLSPSADHA ECARSSLPCD EANAKKKPRL GWGEGLAKYE KKKVEIPDGS VITIVNAEAT  300
QSLNSSLIDK GPRGSGFFDC TSPATPSSVI CGSSPGGDEK SSGKASSDND VNNFGSPGSG  360
FQNQYEGSPA SNLEKLDRFS IPNLGSPLSQ LLQSTDSTSV DSRVVSFTAL SKLLAYKKEI  420
SKVLEMTETE IDLLENELKG LRSGSKGYFS SIPLASISLP VGDKCFEEHN NVTDMIPPVA  480
TLPVVTSTNN NSITMPHSTS DSEEVHADVK ENDQSDAKES VIMKEKLTLT GCSVEDNVVA  540
SVDNNMLIKS EGLALEPISS DIYEYADEGG DNVFDLILAS NKKSAREASE ALIRLLPANE  600
QKIDIWSTNA CSQNQCSMKE RFAKRKKLLR FKERVIALKF RAYQSLWKES LHVPPVRNLR  660
TKSQKKYQLS LWTNYSAYQK NRSSIRFRMP SPGNLNPVSN TEIQKHVSKQ LSNPQTKQYR  720
KTLKMPTLIL DKKDKMASRF ISNNGLVEDP CAVEKERMMI NPWTSEEKDV FMEKLEYFGK  780
DFGKIASFLD HKTTADCIEF YYKNHKSDCF EKTKKLEFGK KAKSSTGNYL ITTGKKWNPE  840
TNAASLDILG AASAMTACAH KYSSSRLGGR TACYTTQFDD NLSERAKSFH SFGNEREKVA  900
ADVLAGICGS LSSEAMGSSC ITGNFHRRDG SQDLKCKKGA TTILRRRMTA NLLQSVDDEV  960
CSDESCGEMD PSYWTDGEKS LFIEAVTVYG KNFSMISTHV GSKSMDQCKV FFCKARKCLG  1020
LDLICSAKKM PANGGDCNAN GFPCEAGVDR NAFPCEGVGN GGELESMNPQ STCQEVKEIN  1080
SHSNTAVDAM VSDACHRKDT SHSALDEDCQ SVNSANDKNR LLHNHAVVSD ETAKEQGNSS  1140
RVTVSVGNGL DAETKRGNID TSTGQGAKAS AHTADSSSAS LNSHVTSVPK DEQGRLHVRV  1200
RSRSLSDSEQ LSINGDVKLF GQILTHSSSV PSSSSNGNRT QHKFKRRLKA SSHGNLSTAK  1260
FSRKSSSGQE DVPSRSYGIW DGTQLRKGLS SLPDPTTLLS RYPTFDNFSK STSPIEQQQQ  1320
QQQPILNEQK SNCDSQMSEV NSSKVAQEVV GGIIVGEICN DDDDDALDTK LHCNKAEDGG  1380
S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	1e-126	MYB family protein