PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022990115.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 295aa    MW: 31259.7 Da    PI: 7.0107
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022990115.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.83.8e-111255445
                     S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     W+ e d+ + +a + ++ +   +W++Ia+ ++ g+t +++k+++ 
   XP_022990115.1 12 WSLEQDKAFENALASHPEDdsdRWEKIAADVP-GKTVEEIKHHYE 55
                     ********************************.**********96 PP
2Myb_DNA-binding422.1e-13122166347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT++E+ l++ +  ++G+g+W++I+r +  +Rt+ q+ s+ qky
   XP_022990115.1 122 AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKY 166
                      6*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MTVDEAGSSS LWSLEQDKAF ENALASHPED DSDRWEKIAA DVPGKTVEEI KHHYELLVED  60
VNLIESGCVP LPSYSSSSDG SASHAGDEGM TKKNGHFGHC NGDSNHGSKN SRSDQERRKG  120
IAWTEDEHRL FLLGLDKYGK GDWRSISRNF VVTRTPTQVA SHAQKYFIRL NSMNKERRRS  180
SIHDITSVTN GDVSAAQGPI TGQANGSVAA PSGKPTKQPP QPAAGPPGVG MYGGPTIGQP  240
VGGPVVSAVG TPVNIPAPAH MAYGVRAPVA GAVVPGAPVN MGPMTYPMPH TSAHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.11e-107MYB family protein