PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022990113.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 295aa MW: 31259.7 Da PI: 7.0107 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 34.8 | 3.8e-11 | 12 | 55 | 4 | 45 |
S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 W+ e d+ + +a + ++ + +W++Ia+ ++ g+t +++k+++ XP_022990113.1 12 WSLEQDKAFENALASHPEDdsdRWEKIAADVP-GKTVEEIKHHYE 55 ********************************.**********96 PP | |||||||
2 | Myb_DNA-binding | 42 | 2.1e-13 | 122 | 166 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ l++ + ++G+g+W++I+r + +Rt+ q+ s+ qky XP_022990113.1 122 AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKY 166 6*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 295 aa Download sequence |
MTVDEAGSSS LWSLEQDKAF ENALASHPED DSDRWEKIAA DVPGKTVEEI KHHYELLVED 60 VNLIESGCVP LPSYSSSSDG SASHAGDEGM TKKNGHFGHC NGDSNHGSKN SRSDQERRKG 120 IAWTEDEHRL FLLGLDKYGK GDWRSISRNF VVTRTPTQVA SHAQKYFIRL NSMNKERRRS 180 SIHDITSVTN GDVSAAQGPI TGQANGSVAA PSGKPTKQPP QPAAGPPGVG MYGGPTIGQP 240 VGGPVVSAVG TPVNIPAPAH MAYGVRAPVA GAVVPGAPVN MGPMTYPMPH TSAHR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08520.1 | 1e-107 | MYB family protein |