PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022990013.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 466aa MW: 51213.4 Da PI: 6.2207

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022990013.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.9	0.00069	113	135	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+Cg+ +++ ++ +H ++ XP_022990013.1 113 FECPICGQNYRSEEEVSVHVDSC 135 89*****************8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MGDVKDKVKG FMKRFNNPLT SSSSTSFKGP GRVLGSSSSG STTSLPTRPL HNPISNPNLV 60 KPPVANSISA APTRPHLSIK SSPERSPADG FDPFDSFITS GKKSGNGYSL NVFECPICGQ 120 NYRSEEEVSV HVDSCVDDNT ARRPADLLLT NDAESPSELE GCLGTFLSGK PSQGSLKIIL 180 TLLRNIIREP ENSKFRKIRL SNPKIKEAIG EAVGGVELLE FVGFKLQEQD GEMWATMEIP 240 TEEEINILSK VIDSIDQPKL DEQEKRGSST ASTDQLIEPK KVDRQTRVFF AIPENVAANI 300 ELPDSFYKLS IEEVKREAVM RKQKIAESQL LVPKSYKEKQ AKAARRKYNR TVIRIQFPDG 360 VVLQGVFSPW EPTSALYEFV STALKEPSLE FELIQPVGVK RRTIAHFPAV GEKTKTLDDL 420 ELVPSALVKF RPIETDSVVF TGLCNELLEI IEPLVSGSAV APPAQG

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MGDVKDKVKG FMKRFNNPLT SSSSTSFKGP GRVLGSSSSG STTSLPTRPL HNPISNPNLV  60
KPPVANSISA APTRPHLSIK SSPERSPADG FDPFDSFITS GKKSGNGYSL NVFECPICGQ  120
NYRSEEEVSV HVDSCVDDNT ARRPADLLLT NDAESPSELE GCLGTFLSGK PSQGSLKIIL  180
TLLRNIIREP ENSKFRKIRL SNPKIKEAIG EAVGGVELLE FVGFKLQEQD GEMWATMEIP  240
TEEEINILSK VIDSIDQPKL DEQEKRGSST ASTDQLIEPK KVDRQTRVFF AIPENVAANI  300
ELPDSFYKLS IEEVKREAVM RKQKIAESQL LVPKSYKEKQ AKAARRKYNR TVIRIQFPDG  360
VVLQGVFSPW EPTSALYEFV STALKEPSLE FELIQPVGVK RRTIAHFPAV GEKTKTLDDL  420
ELVPSALVKF RPIETDSVVF TGLCNELLEI IEPLVSGSAV APPAQG