PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022990012.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 627aa MW: 70914.1 Da PI: 4.666

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022990012.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	182.3	1.2e-56	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv +yLk+k++g+++el e+i+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd++v XP_022990012.1 6 LPPGFRFHPTDEELVAYYLKRKINGREIEL-EIIPEVDLYKCEPWDLPgKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVN 99 79**************************.99***********6434555777*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s ++++vg+kktLv+y+grap+g +tdWvmheyrl XP_022990012.1 100 S-QSRAVGMKKTLVYYRGRAPHGARTDWVMHEYRL 133 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 627 aa Download sequence
MAPVSLPPGF RFHPTDEELV AYYLKRKING REIELEIIPE VDLYKCEPWD LPGKSLLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QSRAVGMKKT LVYYRGRAPH 120 GARTDWVMHE YRLDDRECDV PSSGLQDAYA LCRVFKKSAT IAPKIEENQQ YCNITSSSNQ 180 FINNDQSSEL YSEGRCEEPE SSNYSMPFDG FQSHQVNNDC SFDMFGGRRE GKWSQFLSQE 240 AFNSAPSLPS YANIPYPPSK VDIALECARL QHRFTLPPLE VEGFPNSSYS DHFKMPQPVD 300 PTMLGGSSET STDILQEILS VAQASQELAN QSSVVETTTW DGGLANVYGC SNEDFNFMAN 360 KDGFHDWNSS TRFHVESSWD DPFSKCIEVG NVGDEIPVEN LRWVGMSNKD LDKNCMEESK 420 LVPIENISSF PIEEQASGQM NDFSLTFINE DDSNANNFVM EGSGNSIVNY SSSPSFEVVE 480 EIKVNHGLFI STRQVAETFF HQTMPSETVK VQTLTSFMAP NFISFHERTP QKTASFFNGS 540 SLKKPWKSLR RKIVSILEIL MIFVTVFSEG EEKEDDDDNG EGEKLLSEEE ELRSKGKGEG 600 LNMILKKTAI FFSIASLALC SIWANYN

Sequence ? help Back to Top

Protein Sequence Length: 627 aa Download sequence

MAPVSLPPGF RFHPTDEELV AYYLKRKING REIELEIIPE VDLYKCEPWD LPGKSLLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QSRAVGMKKT LVYYRGRAPH  120
GARTDWVMHE YRLDDRECDV PSSGLQDAYA LCRVFKKSAT IAPKIEENQQ YCNITSSSNQ  180
FINNDQSSEL YSEGRCEEPE SSNYSMPFDG FQSHQVNNDC SFDMFGGRRE GKWSQFLSQE  240
AFNSAPSLPS YANIPYPPSK VDIALECARL QHRFTLPPLE VEGFPNSSYS DHFKMPQPVD  300
PTMLGGSSET STDILQEILS VAQASQELAN QSSVVETTTW DGGLANVYGC SNEDFNFMAN  360
KDGFHDWNSS TRFHVESSWD DPFSKCIEVG NVGDEIPVEN LRWVGMSNKD LDKNCMEESK  420
LVPIENISSF PIEEQASGQM NDFSLTFINE DDSNANNFVM EGSGNSIVNY SSSPSFEVVE  480
EIKVNHGLFI STRQVAETFF HQTMPSETVK VQTLTSFMAP NFISFHERTP QKTASFFNGS  540
SLKKPWKSLR RKIVSILEIL MIFVTVFSEG EEKEDDDDNG EGEKLLSEEE ELRSKGKGEG  600
LNMILKKTAI FFSIASLALC SIWANYN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-160	NAC family protein