PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022989899.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 436aa MW: 47431.4 Da PI: 6.6477 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56 | 9.4e-18 | 50 | 97 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +++++G g+W++ +++ g+ R++k+c++rw +yl XP_022989899.1 50 KGPWTPEEDQKLLAYIEEHGHGSWRALPSKAGLQRCGKSCRLRWINYL 97 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.6 | 1e-16 | 103 | 148 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG++ W++Ia +++ +Rt++++k++w+++l XP_022989899.1 103 RGKFSLQEEQTIIQLHALLGNR-WSAIATHLP-KRTDNEIKNYWNTHL 148 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 436 aa Download sequence |
MPLPISSFTN HTHSLTHSLS SSSSSSSSSS SSSSSPMGRS PCCDKVGLKK GPWTPEEDQK 60 LLAYIEEHGH GSWRALPSKA GLQRCGKSCR LRWINYLRPD IKRGKFSLQE EQTIIQLHAL 120 LGNRWSAIAT HLPKRTDNEI KNYWNTHLKK RLAKMGIDPV THKPKNDALL TGDGQPKSAA 180 NLSHIAQWES ARLEAEARLV RESRLRNNNS HSSLQQLPNP PCFPPSSSST STSAQLLPNS 240 DSPAAMASRS LEALKAWNNG WSKSAEGTGG ILTRVIGGDL ESPTSTLTFS ENVLPVMATG 300 CGEGENSAAM IEFVGSSSSC EREWKEEGFG NSSQLPEYKE GFENSMSFTS HDMTLSIEAT 360 WTAESLRTKE AIAEEGFTNL LLNNKVERSQ SEGGGGGEDS ENGSGSAASD YYEDNKNYWN 420 SILNLVNSSP SNSSIF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01140.1 | 1e-107 | MYB family protein |