PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022989844.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family BBR-BPC
Protein Properties Length: 280aa    MW: 31114.7 Da    PI: 10.2414
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022989844.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind330.54.5e-10112801301
       GAGA_bind   1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki....rernlalsekkaavaerd.........maflqrdkalaernkalverdnkll 82 
                     mddd+ + rn+gyyep+  +k +lglqlms i+erd k     r+  + + + +a++++rd         m++  rd++  +        ++++l
  XP_022989844.1   1 MDDDALNMRNWGYYEPS--FKGHLGLQLMSPITERDMKHflpgRDPSV-MVNANATFHPRDcvvseapvhMNY-IRDNWGGN-------PRDRFL 84 
                     9***9999*******99..*******************99*9999999.9***********888888888888.78888777.......56789* PP

       GAGA_bind  83 alllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkk 177
                     ++l+++++        + vl+gt+ ++slq      l++++     +++l a+ +ee + +++  k kk++++++ pk++kakk++k      k+
  XP_022989844.1  85 NMLPANHN--------YPVLPGTSGAHSLQI-----LQPPSSS---RDELVANRVEEPPVKKEGGKAKKRQSSETGPKTPKAKKPRKL-----KD 158
                     ****9997........889********9999.....5555554...333455555555555555555555666777888888888882.....22 PP

       GAGA_bind 178 vkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekL 272
                     ++++   +r+k +kk+idlv+ng+++D+s++P+PvCsCtG+++qCY+WG+GGWqSaCCtt+iS+yPLP+s krrgaRiagrKmSqgafkk+LekL
  XP_022989844.1 159 TSTAV--PRAKPPKKNIDLVINGIDMDISGIPIPVCSCTGSPHQCYRWGCGGWQSACCTTNISTYPLPMSDKRRGARIAGRKMSQGAFKKVLEKL 251
                     33333..6899************************************************************************************ PP

       GAGA_bind 273 aaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     aa+Gy+++np+DL++hWA+HGtnkfvti+
  XP_022989844.1 252 AADGYNFANPIDLRSHWARHGTNKFVTIK 280
                     ****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MDDDALNMRN WGYYEPSFKG HLGLQLMSPI TERDMKHFLP GRDPSVMVNA NATFHPRDCV  60
VSEAPVHMNY IRDNWGGNPR DRFLNMLPAN HNYPVLPGTS GAHSLQILQP PSSSRDELVA  120
NRVEEPPVKK EGGKAKKRQS SETGPKTPKA KKPRKLKDTS TAVPRAKPPK KNIDLVINGI  180
DMDISGIPIP VCSCTGSPHQ CYRWGCGGWQ SACCTTNIST YPLPMSDKRR GARIAGRKMS  240
QGAFKKVLEK LAADGYNFAN PIDLRSHWAR HGTNKFVTIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.11e-105BBR-BPC family protein