PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022989643.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 482aa MW: 52743.8 Da PI: 8.0411

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022989643.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.5	5.5e-33	204	260	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK+vkg efprsYY+Ct+++Cpv+kkvers +++v+ei+Y+geHnh+ XP_022989643.1 204 DDGYNWRKYGQKQVKGGEFPRSYYKCTHPNCPVRKKVERSL-EGQVTEIIYKGEHNHK 260 8**************************************.*************8 PP
2	WRKY	106.8	1.1e-33	374	432	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vkg+++prsYY+Ct++gC+v+k+ver+++dpk+v++tYeg+Hnh+ XP_022989643.1 374 LDDGYRWRKYGQKIVKGNPYPRSYYKCTTPGCNVRKHVERASTDPKAVITTYEGKHNHD 432 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MGDDEEELPP SSPQPPSKLK PRPLRPTINL PPRTSMESLF SGGPGLGFGF SPGPMTLVSS 60 FFSDPDDCKS FSQLLAGAMT SPVAVPPLES EFKGPPGLLD SPGLLSPSQG PFGMTHQQAL 120 AQVTMQAAEA CSHKQIQAAS LSPSVAPYAS SLQLSTTFLG EKIKDQPMQP SFPNAGLASK 180 EVLDISQSEQ RVQSSLCTVG RPADDGYNWR KYGQKQVKGG EFPRSYYKCT HPNCPVRKKV 240 ERSLEGQVTE IIYKGEHNHK QPQPNKGGKD VGNSNGYSNP EMCSQVQSKL NELKDVSSIK 300 NDQESSHVTH EQLSGTSDGE GGSEIETGLN RKDDDEPDAK RRNTEVRLPE PASSHRTLAE 360 SRIIVQTTSE VDLLDDGYRW RKYGQKIVKG NPYPRSYYKC TTPGCNVRKH VERASTDPKA 420 VITTYEGKHN HDVPAGKISS HRSVNSNVPQ LKSHNISNKN NDHGNSRHQH AGVLRLKEEQ 480 IT

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MGDDEEELPP SSPQPPSKLK PRPLRPTINL PPRTSMESLF SGGPGLGFGF SPGPMTLVSS  60
FFSDPDDCKS FSQLLAGAMT SPVAVPPLES EFKGPPGLLD SPGLLSPSQG PFGMTHQQAL  120
AQVTMQAAEA CSHKQIQAAS LSPSVAPYAS SLQLSTTFLG EKIKDQPMQP SFPNAGLASK  180
EVLDISQSEQ RVQSSLCTVG RPADDGYNWR KYGQKQVKGG EFPRSYYKCT HPNCPVRKKV  240
ERSLEGQVTE IIYKGEHNHK QPQPNKGGKD VGNSNGYSNP EMCSQVQSKL NELKDVSSIK  300
NDQESSHVTH EQLSGTSDGE GGSEIETGLN RKDDDEPDAK RRNTEVRLPE PASSHRTLAE  360
SRIIVQTTSE VDLLDDGYRW RKYGQKIVKG NPYPRSYYKC TTPGCNVRKH VERASTDPKA  420
VITTYEGKHN HDVPAGKISS HRSVNSNVPQ LKSHNISNKN NDHGNSRHQH AGVLRLKEEQ  480
IT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13960.2	1e-128	WRKY family protein