PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022989549.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 286aa MW: 32301 Da PI: 4.6811 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 63.1 | 4e-20 | 73 | 126 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++ +eq++ Le+ Fe+++++ e++ +LAkklgL+ rqV vWFqNrRa++k XP_022989549.1 73 KKRRLANEQVQMLEKSFEEENKLEPERKSQLAKKLGLQPRQVAVWFQNRRARWK 126 566899***********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 131.7 | 2.7e-42 | 72 | 163 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrl++eqv++LE+sFeee+kLeperK++la++LglqprqvavWFqnrRAR+ktkqlE+dy++Lk++yd l+++ +++ ke++ L++e++ XP_022989549.1 72 EKKRRLANEQVQMLEKSFEEENKLEPERKSQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDVLKASYDLLMSNYDSIVKENAVLKSEVA 163 69**************************************************************************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 286 aa Download sequence |
MESGRFLFNP PACGGNMLCL GGAGGGDRFL RGRTMMSMSM NMSMQESSKG RPFFRSPDDL 60 YDDEYYDELY PEKKRRLANE QVQMLEKSFE EENKLEPERK SQLAKKLGLQ PRQVAVWFQN 120 RRARWKTKQL ERDYDVLKAS YDLLMSNYDS IVKENAVLKS EVASLTEKCV AKELDGGEAP 180 IPCTTSEPLR ADTAHVSAPH SGGSGRKAED RLSSGSDSSA VIDDNCLQLI DSGDSYFPSN 240 EYPLPPGLQM EHDDRNYNSN YLFSDMFAET NQQNQEGGPP AWWAWP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 121 | 129 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 2e-76 | HD-ZIP family protein |