PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022989548.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 287aa    MW: 32430.1 Da    PI: 4.6322
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022989548.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.14e-2074127356
                     --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     k++++ +eq++ Le+ Fe+++++  e++ +LAkklgL+ rqV vWFqNrRa++k
  XP_022989548.1  74 KKRRLANEQVQMLEKSFEEENKLEPERKSQLAKKLGLQPRQVAVWFQNRRARWK 127
                     566899***********************************************9 PP

2HD-ZIP_I/II131.72.7e-4273164192
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                     ekkrrl++eqv++LE+sFeee+kLeperK++la++LglqprqvavWFqnrRAR+ktkqlE+dy++Lk++yd l+++ +++ ke++ L++e++
  XP_022989548.1  73 EKKRRLANEQVQMLEKSFEEENKLEPERKSQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDVLKASYDLLMSNYDSIVKENAVLKSEVA 164
                     69**************************************************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MESGRFLFNP PACGGNMLCL GGAGGGDRFL REGRTMMSMS MNMSMQESSK GRPFFRSPDD  60
LYDDEYYDEL YPEKKRRLAN EQVQMLEKSF EEENKLEPER KSQLAKKLGL QPRQVAVWFQ  120
NRRARWKTKQ LERDYDVLKA SYDLLMSNYD SIVKENAVLK SEVASLTEKC VAKELDGGEA  180
PIPCTTSEPL RADTAHVSAP HSGGSGRKAE DRLSSGSDSS AVIDDNCLQL IDSGDSYFPS  240
NEYPLPPGLQ MEHDDRNYNS NYLFSDMFAE TNQQNQEGGP PAWWAWP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1122130RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.14e-76HD-ZIP family protein