PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022989544.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 1672aa MW: 183161 Da PI: 6.404

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022989544.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.9	5.4e-09	1008	1049	2	45
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +WT eE +l +av +G++ ++ I+r++ +++ qck ++ XP_022989544.1 1008 SNWTDEEKSILMQAVSSYGKD-FDMISRCVR-SKSRDQCKVFFS 1049 58***************99.*****.******8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1672 aa Download sequence
MPPEPLPWDR KDLFKERKHE KSEAIGSATR WRDSYHGSRE FNRWGSADFR RPTGHGKLGG 60 WHQFSEETSH GYGPSRSFSD RVLEDESFRP SVPRGDGKYN RIGRESRGSF SQRDWRSHSK 120 ENSKEFGNPS RRPSSQDASS DQRSLDDTVT YSSPQSDFVS VSDKIHSKDR NDKVGGVYGL 180 GNGPRSDVEV SLGSTDWKPL KWSRSGSLSS RGSAYSSSTN SKNEKTDLPR RVASPLQSPS 240 ADATACLTSS LPSEDAISRK KPRLGWGDGL AKYEKEKVEV PDGSLRKEVT VLSSSSAELT 300 HSLGSNFAEK SPKTLPFSDC ASPATPSSFA CSSSSGLEDK PFSKAASVDG MICSSPGSSS 360 QNHLQKLFSS IEKVEISSIT NLGSSLVELF NSDDPSSVES CFGKSTLNKL LTYKGEISKT 420 LETTESEIDF LENELKSLKS ENGGNVSHPK SCSAVHLVES VPYFKEQDGV SCIAPRPAPL 480 KIVSSSDATV EKMPVCIGDM GIEDGSTKAD EIDSPGTVTS KFNEPSRVVK AVASDLVEND 540 HCSEATDSIV PHKMEGSSKK SGPFVDEHLT IGSGNECILA KSCTSESIYG DMTTQADSGS 600 SLCDLIFARN KEYASKAAEV IFKELPTEMC KISTQSIKIV SCFETEKLVK EKIAMRRQFL 660 KFKESALTLR FKALQHSWKE GLLHSVKKSR SRPQKKELSL RVTHSGHQKY RSSIRSRFVQ 720 HGECQNPVVN SEIAIRYSSK LLLNPQVKLY RNTLKMPAMI LDKNEKMALR FISHNGLVED 780 PCAVEKERNM INPWTSAERE IFWEKLSLFG KDFRKISSFL DLKTTADCIQ FYYKNHKSDS 840 FKKNKNLELG KQVKSSAATY MLTSGKKWNP DVNATSLDIL GVASEMAAQA DVDIENQQKC 900 NRHLGMGRDI GSKVSWSAST PSNKNNLDAL QTEKETVAAD VLAGICGSIS SEALSSCLTS 960 AIDPSEDHKE RKCHKVDSAT KLPSTSDVMQ KTDNEPCSDD SSEDVDSSNW TDEEKSILMQ 1020 AVSSYGKDFD MISRCVRSKS RDQCKVFFSK ARKCLGLDLI HTSGDVGTPG SGNDSSGSGT 1080 DTDDHCVVET CGARSSDEFV SKSVNGLSTS VIINHEESVS AVTANMRNSS QFEESTAFEQ 1140 LDVTGAEAVG NLVSEISKEE DAPNLDSHSA CSLTNAAAFP SQPAHDHKIE GCSENTEACK 1200 RCNEPDILRP ESVATVDENS AAVSESRATT ELAFGGEDGS DTNLHGQSML QRSFQDSTGF 1260 NSNLALESLG FDPQISHPKI LKVDSVANKS CIKDENSLVV RNSGPGIIGR EEMLNQDMFP 1320 SALVLQGVGD AHQKPMNRDD CADHQNRLSR HIESSEFPSS YPFNKQIVED INRNINHTDF 1380 PAFQGLSKIN CNGTYVVEDC YPQNCNSSKE PCHRAAELPL LPKNVELGHD HQNTSCSGNA 1440 SDSDVPHRKG DVKLFGQILS HAPSLQNLSS GSNDCREEKE FHKLRSKSYD MGENVPLRSY 1500 CFWDGSRIQT GLSTLPDSAI LQAKYPAAFS GYSATSLKTE QQPLRAFANN GDRNLNELVS 1560 AFPTKDGVVD YQSYRIRDGV NMRPFPVDLF SEMHRRNGYD PLSLSSLQQQ GRVVVGRGGI 1620 LMGGSCTGVS DPVAAIKMHY AKSDQYVRQP GSTFTREDGS WRGGNGDLGS SR

Sequence ? help Back to Top

Protein Sequence Length: 1672 aa Download sequence

MPPEPLPWDR KDLFKERKHE KSEAIGSATR WRDSYHGSRE FNRWGSADFR RPTGHGKLGG  60
WHQFSEETSH GYGPSRSFSD RVLEDESFRP SVPRGDGKYN RIGRESRGSF SQRDWRSHSK  120
ENSKEFGNPS RRPSSQDASS DQRSLDDTVT YSSPQSDFVS VSDKIHSKDR NDKVGGVYGL  180
GNGPRSDVEV SLGSTDWKPL KWSRSGSLSS RGSAYSSSTN SKNEKTDLPR RVASPLQSPS  240
ADATACLTSS LPSEDAISRK KPRLGWGDGL AKYEKEKVEV PDGSLRKEVT VLSSSSAELT  300
HSLGSNFAEK SPKTLPFSDC ASPATPSSFA CSSSSGLEDK PFSKAASVDG MICSSPGSSS  360
QNHLQKLFSS IEKVEISSIT NLGSSLVELF NSDDPSSVES CFGKSTLNKL LTYKGEISKT  420
LETTESEIDF LENELKSLKS ENGGNVSHPK SCSAVHLVES VPYFKEQDGV SCIAPRPAPL  480
KIVSSSDATV EKMPVCIGDM GIEDGSTKAD EIDSPGTVTS KFNEPSRVVK AVASDLVEND  540
HCSEATDSIV PHKMEGSSKK SGPFVDEHLT IGSGNECILA KSCTSESIYG DMTTQADSGS  600
SLCDLIFARN KEYASKAAEV IFKELPTEMC KISTQSIKIV SCFETEKLVK EKIAMRRQFL  660
KFKESALTLR FKALQHSWKE GLLHSVKKSR SRPQKKELSL RVTHSGHQKY RSSIRSRFVQ  720
HGECQNPVVN SEIAIRYSSK LLLNPQVKLY RNTLKMPAMI LDKNEKMALR FISHNGLVED  780
PCAVEKERNM INPWTSAERE IFWEKLSLFG KDFRKISSFL DLKTTADCIQ FYYKNHKSDS  840
FKKNKNLELG KQVKSSAATY MLTSGKKWNP DVNATSLDIL GVASEMAAQA DVDIENQQKC  900
NRHLGMGRDI GSKVSWSAST PSNKNNLDAL QTEKETVAAD VLAGICGSIS SEALSSCLTS  960
AIDPSEDHKE RKCHKVDSAT KLPSTSDVMQ KTDNEPCSDD SSEDVDSSNW TDEEKSILMQ  1020
AVSSYGKDFD MISRCVRSKS RDQCKVFFSK ARKCLGLDLI HTSGDVGTPG SGNDSSGSGT  1080
DTDDHCVVET CGARSSDEFV SKSVNGLSTS VIINHEESVS AVTANMRNSS QFEESTAFEQ  1140
LDVTGAEAVG NLVSEISKEE DAPNLDSHSA CSLTNAAAFP SQPAHDHKIE GCSENTEACK  1200
RCNEPDILRP ESVATVDENS AAVSESRATT ELAFGGEDGS DTNLHGQSML QRSFQDSTGF  1260
NSNLALESLG FDPQISHPKI LKVDSVANKS CIKDENSLVV RNSGPGIIGR EEMLNQDMFP  1320
SALVLQGVGD AHQKPMNRDD CADHQNRLSR HIESSEFPSS YPFNKQIVED INRNINHTDF  1380
PAFQGLSKIN CNGTYVVEDC YPQNCNSSKE PCHRAAELPL LPKNVELGHD HQNTSCSGNA  1440
SDSDVPHRKG DVKLFGQILS HAPSLQNLSS GSNDCREEKE FHKLRSKSYD MGENVPLRSY  1500
CFWDGSRIQT GLSTLPDSAI LQAKYPAAFS GYSATSLKTE QQPLRAFANN GDRNLNELVS  1560
AFPTKDGVVD YQSYRIRDGV NMRPFPVDLF SEMHRRNGYD PLSLSSLQQQ GRVVVGRGGI  1620
LMGGSCTGVS DPVAAIKMHY AKSDQYVRQP GSTFTREDGS WRGGNGDLGS SR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	1e-114	MYB family protein