PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022989488.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C3H | ||||||||
Protein Properties | Length: 148aa MW: 16832.8 Da PI: 8.2001 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 33 | 9.9e-11 | 53 | 79 | 1 | 27 |
--S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHgp 27 ++t+ C++f+ tG+C+yGd+Ck+ H++ XP_022989488.1 53 FGTRVCNRFLTTGFCQYGDSCKYFHSK 79 68*********************9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 148 aa Download sequence |
MPLGKYYCDY CEKQFQDTPF ARKRHLQSLS HQKAKALWFD SFRDSNQPFS DAFGTRVCNR 60 FLTTGFCQYG DSCKYFHSKN NLQYSSSQPI AGFPENNQAP NVPVNQFMEG SSLTGSLDRL 120 RTSWGNLPPS LMPPPEGGYP PLPFVDWG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26749.1 | 9e-33 | C3H family protein |