PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022989224.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family LBD
Protein Properties Length: 186aa    MW: 20892.5 Da    PI: 8.5453
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022989224.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260138.81.8e-43281271100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrrkC ++Cv+a yfp+e+p+kfanvhk+FGasnv+kll+++++++reda++sl+yeAear++dPvyG+vg i+ lq+q+ +l+ el+
  XP_022989224.1  28 PCAACKFLRRKCLPNCVFALYFPSEEPQKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELD 122
                     7*********************************************************************************************9 PP

          DUF260  96 llkee 100
                     +++++
  XP_022989224.1 123 ATNAN 127
                     98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MLKQQLKQRK EMEKNYGKMS SSTYSNSPCA ACKFLRRKCL PNCVFALYFP SEEPQKFANV  60
HKIFGASNVS KLLNEVQPHQ REDAVNSLAY EAEARMKDPV YGCVGAISIL QRQVIKLQRE  120
LDATNANLIR YACSELPAPS SSQYARRSSS TSHIGSSSTS SYGHYYSGLY FCDPCGDDHD  180
KGEEHK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27650.11e-66LBD family protein