PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022989033.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 316aa MW: 35713.9 Da PI: 5.0494 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.1 | 4.3e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv +++ +G+g+W+t ++ g+ R++k+c++rw +yl XP_022989033.1 14 KGPWTPEEDQKLVGYIQIHGPGNWRTLPKNAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 55 | 1.9e-17 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W++Ia +++ gRt++++k++w+++ XP_022989033.1 67 RGRFSFEEEETIIQLHSVLGNK-WSAIATHLP-GRTDNEIKNYWNTH 111 89********************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 316 aa Download sequence |
MGRAPCCDKN GLKKGPWTPE EDQKLVGYIQ IHGPGNWRTL PKNAGLQRCG KSCRLRWTNY 60 LRPDIKRGRF SFEEEETIIQ LHSVLGNKWS AIATHLPGRT DNEIKNYWNT HIRKKLLRMG 120 IDPVTHTPRI DLLDLSSIIA TAIRSHPILG LSTLLNNQAQ ALNPESLRLI STLLALKQER 180 DPNANNSQLQ NQEHAQIQAQ MDTLSQLLQP NEEFNNNTNS SMIPITNFVE CSNSQENMNF 240 LASNLSGDDV LMNQVNDVYD DGSQPKASDL PEITNDLQNS SSTCMNNSSN EDERDSFCSN 300 FLQFEIPQGL DFDDFM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21440.1 | 1e-101 | MYB family protein |