PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022988928.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family SRS
Protein Properties Length: 292aa    MW: 31015.9 Da    PI: 9.0358
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022988928.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702187.26.4e-581152717153
          DUF702   7 sCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa..aeaaskrkrelkskkqsalsstklssaeskke 99 
                      C+dCGn+akk+C+++RCRtCCk rg +C+thvkstWvpa++rrerq    +    ++ s+  ++a +kr++ l    +++++++++s+a+++++
  XP_022988928.1 115 VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATSGSSgsSSAGAKRPKVL--IPSQTAAAASTSNATTPRS 207
                     6*********************************************9888776666555552255555566555..5555556666778888888 PP

          DUF702 100 letss..........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153
                     +et+s          lP +v+++avf+c rv++++ g  el+Yq++v+igGhvfkG+LydqG++
  XP_022988928.1 208 FETTSshqdasfkksLPGQVRAPAVFKCHRVTAISSGVGELTYQATVNIGGHVFKGFLYDQGAD 271
                     888888899999999***********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MLGLRDVLFI APTPSSLHQH TQIISSDHHP SLPLPSSTAL GVSVGIFPLL AATPCLQPPP  60
NQMPDEVSDR CRSLENLKRT QDFGFGKGDS LIGGGGNHGY DDQVKGDGGD GSLGVCRDCG  120
NRAKKECEYR RCRTCCKGRG NHCSTHVKST WVPASRRRER QMLVVMDGVA TSGSSGSSSA  180
GAKRPKVLIP SQTAAAASTS NATTPRSFET TSSHQDASFK KSLPGQVRAP AVFKCHRVTA  240
ISSGVGELTY QATVNIGGHV FKGFLYDQGA DVKNALPSIS HLHLESGNHL RD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12330.11e-54SRS family protein