PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022988750.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 437aa MW: 48593.5 Da PI: 6.3829

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022988750.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.8	9.4e-17	28	75	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTt Ed +l+++v+++G g+W+++ ++ g+ R++k+c++rw ++l XP_022988750.1 28 KGPWTTAEDGILIEYVQKHGEGNWNAVQKHTGLPRCGKSCRLRWANHL 75 79****************************99********9986 PP
2	Myb_DNA-binding	50.6	4.6e-16	81	124	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++++eE+ l+++++++lG++ W++ a+ ++ gRt++++k++w++ XP_022988750.1 81 KGSFSQEEERLIIELHAKLGNK-WARMAAQLP-GRTDNEIKNYWNT 124 799*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MVESNGERRR SHGDHQEDGG AAEPALKKGP WTTAEDGILI EYVQKHGEGN WNAVQKHTGL 60 PRCGKSCRLR WANHLRPNLK KGSFSQEEER LIIELHAKLG NKWARMAAQL PGRTDNEIKN 120 YWNTRMKRRQ RAGLPLYPLD LQQEATAFQL RQHQNHRSST TTTNVSVLRQ KLEFDNNIQN 180 SVSVFNFSST MNNPQKNFSD GSLFYAAPTN QFKFFTENNG GGGFLPLSPV SPFHQIGQQQ 240 VNNNSLSSLP LPVLPSQAAL QLSYGGYMEA EARSRNGKQT KEESSSGGQL KRTAEQGSTE 300 EQGANNLNVR SVEGSSGGDA AVPAGENHSD GFSFTHSSSR KRQRMEPLEE MDSMVDDDLM 360 SLLSNFQTEM PVPELYPNNS NDDLGINTHD DLSLRETNGN RDEDEQRPNV GTTSTVASPV 420 LEWSLGSSCW NNMPSIC

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MVESNGERRR SHGDHQEDGG AAEPALKKGP WTTAEDGILI EYVQKHGEGN WNAVQKHTGL  60
PRCGKSCRLR WANHLRPNLK KGSFSQEEER LIIELHAKLG NKWARMAAQL PGRTDNEIKN  120
YWNTRMKRRQ RAGLPLYPLD LQQEATAFQL RQHQNHRSST TTTNVSVLRQ KLEFDNNIQN  180
SVSVFNFSST MNNPQKNFSD GSLFYAAPTN QFKFFTENNG GGGFLPLSPV SPFHQIGQQQ  240
VNNNSLSSLP LPVLPSQAAL QLSYGGYMEA EARSRNGKQT KEESSSGGQL KRTAEQGSTE  300
EQGANNLNVR SVEGSSGGDA AVPAGENHSD GFSFTHSSSR KRQRMEPLEE MDSMVDDDLM  360
SLLSNFQTEM PVPELYPNNS NDDLGINTHD DLSLRETNGN RDEDEQRPNV GTTSTVASPV  420
LEWSLGSSCW NNMPSIC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.1	1e-72	MYB family protein