PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022988670.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | CAMTA | ||||||||
Protein Properties | Length: 1090aa MW: 121515 Da PI: 5.906 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 181.2 | 1.2e-56 | 20 | 136 | 2 | 118 |
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 ++ ++rwl++ ei++iL n+ k+++++e+++rp+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+hekLKvg+++vl+cyYah+een++fqr XP_022988670.1 20 IEARHRWLRPAEICEILRNYPKFHIASEPPERPSSGSLFLFDRKVLRYFRKDGHKWRKKKDGKTVKEAHEKLKVGSIDVLHCYYAHGEENENFQR 114 4569******************************************************************************************* PP CG-1 97 rcywlLeeelekivlvhylevk 118 r+yw+Lee+l +iv+vhylevk XP_022988670.1 115 RSYWMLEEHLMHIVFVHYLEVK 136 *******************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1090 aa Download sequence |
MADRGSYGLA PRLDIDQLLI EARHRWLRPA EICEILRNYP KFHIASEPPE RPSSGSLFLF 60 DRKVLRYFRK DGHKWRKKKD GKTVKEAHEK LKVGSIDVLH CYYAHGEENE NFQRRSYWML 120 EEHLMHIVFV HYLEVKGNRT NIGAVVETDE VSSSSQKSSP MSSSYSSSRN QAAFENADSP 180 SPTSTVTSSY EDADNDTYQE TSRFHSFPTS PLVNNGLLVN KKEAGPSNLY FPHSSSNNVE 240 AWPLAPAVEY VPQVQKDGLG SSDGGTGVIG SQKTLTSASW EEIFQQCTTG FQTVPSQVLN 300 SWIEPLSSGT VLGQDNSIPG KLLAGNSAIK EDFKSSLTMA SNCQVPFEDN TSSFSKGHVD 360 QFPDLYSVYD INGKLTEQKS HNATFGSGHA HPSIENKEFF SKNFEPQFNE GELYSATRLN 420 SENDISKEGS ISYSLALKQS LVDGEESLKK VDSFSRWVSR ELVEVDDLHM HPSSGLSWST 480 VECGDMVDDS SLSPSLSEDQ LFSITDFSPK STLLDLETEV VIIGKFLGNN HATKCYWSCM 540 FGEVEVPAEV LADGILCCHA PPHSVGQVPF YVTCSNRLAC SEVREFDYLA DSAQDVDVTD 600 VYTAGATEEL HMHLRFERLL STRSSDPPNN LSEGALEKRN LIKKLISIKE EEDCYGEEPN 660 SQNDQNQHQS KESLFIKLMK EKLYSWLIRK VIEDGKGPNI LDDKGQGLIH LAAALGYDWA 720 IRPIVATGVS LNFRDVNGWT ALHWAAFYGR ELTVGTLITL GADPGLPSDP SPGDPSGTMP 780 ADLASERGQK GIAGFLAESS LTSYISSVSM ADTKKDGVLD ASEGKAVYTA AERKATPIND 840 GLMPGDLSLK DSLTAVCNAT QAADRIHLMF RVKSFQRKQI SERGPDEFGY SDDSAIPFVA 900 ARARKSRLSN SPDHAAAVHI QKKFRGWKMR KEFLLIRQRI VKIQAIVRGH QVRKQYKKIV 960 WSVGILDKII LRWRRKGSGL RGFRSDTVAK TPPSVVMEPR EEDDGDFLKK GRRQTEERFQ 1020 KALTRVKSMA QYPEGRDQYR RLLTVVQKCR ETKVSNISVT STSEEIIEGD DMIDIDSLLD 1080 DDALMSMTFD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64220.2 | 0.0 | CAMTA family protein |