PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022988669.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | CAMTA | ||||||||
Protein Properties | Length: 1091aa MW: 121644 Da PI: 5.8411 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 181.2 | 1.2e-56 | 20 | 136 | 2 | 118 |
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 ++ ++rwl++ ei++iL n+ k+++++e+++rp+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+hekLKvg+++vl+cyYah+een++fqr XP_022988669.1 20 IEARHRWLRPAEICEILRNYPKFHIASEPPERPSSGSLFLFDRKVLRYFRKDGHKWRKKKDGKTVKEAHEKLKVGSIDVLHCYYAHGEENENFQR 114 4569******************************************************************************************* PP CG-1 97 rcywlLeeelekivlvhylevk 118 r+yw+Lee+l +iv+vhylevk XP_022988669.1 115 RSYWMLEEHLMHIVFVHYLEVK 136 *******************985 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 1091 aa Download sequence |
MADRGSYGLA PRLDIDQLLI EARHRWLRPA EICEILRNYP KFHIASEPPE RPSSGSLFLF 60 DRKVLRYFRK DGHKWRKKKD GKTVKEAHEK LKVGSIDVLH CYYAHGEENE NFQRRSYWML 120 EEHLMHIVFV HYLEVKGNRT NIGAVVETDE VSSSSQKSSP MSSSYSSSRN QAAFENADSP 180 SPTSTVTSSY EDADNEDTYQ ETSRFHSFPT SPLVNNGLLV NKKEAGPSNL YFPHSSSNNV 240 EAWPLAPAVE YVPQVQKDGL GSSDGGTGVI GSQKTLTSAS WEEIFQQCTT GFQTVPSQVL 300 NSWIEPLSSG TVLGQDNSIP GKLLAGNSAI KEDFKSSLTM ASNCQVPFED NTSSFSKGHV 360 DQFPDLYSVY DINGKLTEQK SHNATFGSGH AHPSIENKEF FSKNFEPQFN EGELYSATRL 420 NSENDISKEG SISYSLALKQ SLVDGEESLK KVDSFSRWVS RELVEVDDLH MHPSSGLSWS 480 TVECGDMVDD SSLSPSLSED QLFSITDFSP KSTLLDLETE VVIIGKFLGN NHATKCYWSC 540 MFGEVEVPAE VLADGILCCH APPHSVGQVP FYVTCSNRLA CSEVREFDYL ADSAQDVDVT 600 DVYTAGATEE LHMHLRFERL LSTRSSDPPN NLSEGALEKR NLIKKLISIK EEEDCYGEEP 660 NSQNDQNQHQ SKESLFIKLM KEKLYSWLIR KVIEDGKGPN ILDDKGQGLI HLAAALGYDW 720 AIRPIVATGV SLNFRDVNGW TALHWAAFYG RELTVGTLIT LGADPGLPSD PSPGDPSGTM 780 PADLASERGQ KGIAGFLAES SLTSYISSVS MADTKKDGVL DASEGKAVYT AAERKATPIN 840 DGLMPGDLSL KDSLTAVCNA TQAADRIHLM FRVKSFQRKQ ISERGPDEFG YSDDSAIPFV 900 AARARKSRLS NSPDHAAAVH IQKKFRGWKM RKEFLLIRQR IVKIQAIVRG HQVRKQYKKI 960 VWSVGILDKI ILRWRRKGSG LRGFRSDTVA KTPPSVVMEP REEDDGDFLK KGRRQTEERF 1020 QKALTRVKSM AQYPEGRDQY RRLLTVVQKC RETKVSNISV TSTSEEIIEG DDMIDIDSLL 1080 DDDALMSMTF D |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G64220.2 | 0.0 | CAMTA family protein |