PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022988600.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

AP2

Protein Properties

Length: 360aa MW: 40980.6 Da PI: 7.8055

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022988600.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	49.4	1.1e-15	45	104	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n k+ ++++lg ++ +e Aa a++ a++k++g XP_022988600.1 45 SIYRGVTRHRWTGRYEAHLWDkNCWNEsqnKKgRQVYLGAYDDEEAAAHAYDLAALKYWG 104 57*****************999955656446***********************98 PP
2	AP2	51.2	3e-16	147	198	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g XP_022988600.1 147 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDIAAIEYRG 198 89**99******99966...3.6***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MAKSTSQQLQ IRESNNNVNK NIVMKTKTKR TRRSVPRDSP PQRSSIYRGV TRHRWTGRYE 60 AHLWDKNCWN ESQNKKGRQV YLGAYDDEEA AAHAYDLAAL KYWGQETILN FPLSTYQKEL 120 KEMEGQSREE YIGSLRRKSS GFSRGVSKYR GVARHHHNGR WEARIGRVFG NKYLYLGTYA 180 TQEEAATAYD IAAIEYRGLN AVTNFDLSRY IKWLKPCNDV VYASDHTLNI DSILPSPKQE 240 LDLGLFPSDQ NQSSTDSATA EPIALPPSHR STTTTSALGL LLQSSKFKEM MEMNSATECP 300 STPSSSEKLE RRRCLFPDDV QTFFACDSSG SYCYGEADDA IFSDFNCFVP PPPSHYDFDD

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MAKSTSQQLQ IRESNNNVNK NIVMKTKTKR TRRSVPRDSP PQRSSIYRGV TRHRWTGRYE  60
AHLWDKNCWN ESQNKKGRQV YLGAYDDEEA AAHAYDLAAL KYWGQETILN FPLSTYQKEL  120
KEMEGQSREE YIGSLRRKSS GFSRGVSKYR GVARHHHNGR WEARIGRVFG NKYLYLGTYA  180
TQEEAATAYD IAAIEYRGLN AVTNFDLSRY IKWLKPCNDV VYASDHTLNI DSILPSPKQE  240
LDLGLFPSDQ NQSSTDSATA EPIALPPSHR STTTTSALGL LLQSSKFKEM MEMNSATECP  300
STPSSSEKLE RRRCLFPDDV QTFFACDSSG SYCYGEADDA IFSDFNCFVP PPPSHYDFDD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	1e-103	AP2 family protein