PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022988277.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 273aa MW: 31423.1 Da PI: 8.4951

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022988277.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.3	5.7e-05	5	29	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C+ C s++rk++L+rH+ H XP_022988277.1 5 YICSidGCEASYRRKDHLTRHLLHH 29 899999***************9987 PP
2	zf-C2H2	20.1	1.7e-06	72	96	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp Cgk F+ s+L++H +H XP_022988277.1 72 FVCPedGCGKIFRYASQLQKHEHSH 96 89*******************9888 PP
3	zf-C2H2	20	1.9e-06	165	188	3	23
ET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirt.H 23 C+ C+k+Fs+ snL++H+++ H XP_022988277.1 165 CTheGCSKVFSTISNLHQHMKVvH 188 88889****************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MQRPYICSID GCEASYRRKD HLTRHLLHHQ GLIIKCPIEG CSREFAYISC VNRHLKECHE 60 GGAPPEESQK QFVCPEDGCG KIFRYASQLQ KHEHSHFKLD SIEAYCAEPG CMKTFTNKKC 120 LQAHMQSCHQ YINCEICGEK KLRKNMKQHL RQKHESEGPP GAIPCTHEGC SKVFSTISNL 180 HQHMKVVHLG QKPFACGFPG CGMRFGYKHV RDNHEKKGQH VYTNGDFEAA DEQFRSKPRG 240 GRKRIRPTVE MLIRKRITPP PSELDFIMMD EEC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72050.1	1e-105	C2H2 family protein