PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022988194.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NF-YA | ||||||||
Protein Properties | Length: 244aa MW: 26434.6 Da PI: 5.0362 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 48.6 | 2.7e-15 | 174 | 208 | 1 | 36 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrk 36 ++p++VNaKQyq+Il+RRq+Rak+e+ekkl +k+rk XP_022988194.1 174 QDPVFVNAKQYQGILRRRQARAKAEAEKKL-IKARK 208 58****************************.88887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MQSKSETNNQ LQSDPNGAPS TTIYYEPWCS SMGYSPFPLP VVGGNASSST SLEFPNGGSE 60 SNDGQSVSNN DVNDEEDDVS KEVQATGSPH SAGSYRQDAQ KMQHVSSNLP AMHGECLTQS 120 TQLELVGHSI ACASNPYQDP YYGGMMAFYG HQPVGYPMVG APHARMPLPI EIAQDPVFVN 180 AKQYQGILRR RQARAKAEAE KKLIKARKVD FVSFCWTGLF LCVEGGVMLD LFSDKTILIG 240 SLGI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12840.2 | 1e-30 | NF-YA family protein |