PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022987816.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | GATA | ||||||||
Protein Properties | Length: 256aa MW: 27477.5 Da PI: 10.8531 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 60.5 | 2.1e-19 | 116 | 149 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 Cs C+ttkTplWR+gp+g+k+LCnaCG+++rk + XP_022987816.1 116 CSECNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 149 *******************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MSHLLTPRPS SPSPLRPILL PSLPSALSSA MAPPYHDDLL RRSSSHHLFF PTTTATSSSS 60 SSSSSSSLSF PAPDHSNSDD PRRLQLKHEM IDGARNSHDL NRTTMLNDGA AIIRTCSECN 120 TTKTPLWRSG PRGPKSLCNA CGIRQRKARR AMAEAAAVNG GVPCGGKSAA IILKTNKAVQ 180 HKIMTKPAAK KLKRKRKDDV VVAAGGGGGG KKGCFEDIKI GRRLSEISSS YQRVFPQDER 240 EAAILLMTLS YGLLHG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56860.1 | 2e-16 | GATA family protein |