PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022987756.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C3H
Protein Properties Length: 381aa    MW: 42125.3 Da    PI: 7.7722
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022987756.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH25.32.7e-08138158526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C++f++ G Ck Gd+C FaHg
  XP_022987756.1 138 ACPDFRK-GNCKKGDSCEFAHG 158
                     7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    
MIIGERHRPG PVVHITPLTI PEEPASETRF TYPLSGISVS SDGNANGGDY SSYYLKEALA  60
ALQRYTNVSE IESDSELSGR ESDVPVDAYS CDNFRIFEFK VRKCTRGRSH DWTECPFAHP  120
GEKARRRDPR KYHYSGTACP DFRKGNCKKG DSCEFAHGVF ECWLHPARYR TQPCKDGTNC  180
RRRVCFFAHT PEQLRVLPQQ SPRSAYSPEP YDESPVRQCL DGSCAKSMPF LSSPVSVSPS  240
ATPVDSPPLS PMTRSLGRSL GSSSINEMVA SLRNLHLSKV KSLPSSWNVQ IGSPGYPSRV  300
CHGFCSLPTT PTRAPTAPGV GRLDFSDHGL QEEPAMERVE SGRELRAKML EKLSKENSLD  360
LVDSSSSACT PDVGWVSELL K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29190.11e-109C3H family protein