PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022987706.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 486aa MW: 53404.4 Da PI: 7.0497

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022987706.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	115.9	4.1e-36	61	203	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk........ 79 lp+G++F+Ptd+el+ e+L++kv++k+++ + +i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+++ XP_022987706.1 61 LPAGVKFDPTDQELI-EHLEAKVKSKDMKSHPlidefipTIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKIQtecdlqgg 153 799**********.99*****5553344444434666646******.555666799**************73334555544 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_022987706.1 154 ETRWHKTGKTRPVMA-NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 203 778********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 486 aa Download sequence
MRNSSEIIGS IVGVGGGGGG GGGGGSDSLL DAKLEQHQLC GSKHCPGCGH KLEGRPNWVG 60 LPAGVKFDPT DQELIEHLEA KVKSKDMKSH PLIDEFIPTI EGEDGICYTH PEKLPGVTRD 120 GLSRHFFHRP SKAYTTGTRK RRKIQTECDL QGGETRWHKT GKTRPVMANG KQKGCKKILV 180 LYTNFGKNRK PEKTNWVMHQ YHLGQHEEEK EGELVVSKIF YQTQPRQCNW SERAVAAAEG 240 SFEVANLSRR ENAASGSCSS MAQTEDMSPA ATASVGGSVA SFSSLDIQPH LKSDHFGFVP 300 FRTCFDPVGM EEGSTGRKMG LQDGRGGGTC SGGGEFELRD HRHERTSALD HHHHQLAVAH 360 DEHHHVVNHH QPTTAFHVTT NPTHQISTII SPSPLLLLDH DSYHFHHSPI ILQNQPFHQQ 420 EGEIEHHKMG GRSASGLEEL IMGCTSSSSI THQPETSIAS GREADQWMKY SSFWPDSDNP 480 NLHGHG

Sequence ? help Back to Top

Protein Sequence Length: 486 aa Download sequence

MRNSSEIIGS IVGVGGGGGG GGGGGSDSLL DAKLEQHQLC GSKHCPGCGH KLEGRPNWVG  60
LPAGVKFDPT DQELIEHLEA KVKSKDMKSH PLIDEFIPTI EGEDGICYTH PEKLPGVTRD  120
GLSRHFFHRP SKAYTTGTRK RRKIQTECDL QGGETRWHKT GKTRPVMANG KQKGCKKILV  180
LYTNFGKNRK PEKTNWVMHQ YHLGQHEEEK EGELVVSKIF YQTQPRQCNW SERAVAAAEG  240
SFEVANLSRR ENAASGSCSS MAQTEDMSPA ATASVGGSVA SFSSLDIQPH LKSDHFGFVP  300
FRTCFDPVGM EEGSTGRKMG LQDGRGGGTC SGGGEFELRD HRHERTSALD HHHHQLAVAH  360
DEHHHVVNHH QPTTAFHVTT NPTHQISTII SPSPLLLLDH DSYHFHHSPI ILQNQPFHQQ  420
EGEIEHHKMG GRSASGLEEL IMGCTSSSSI THQPETSIAS GREADQWMKY SSFWPDSDNP  480
NLHGHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-137	NAC family protein