PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022987658.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C3H
Protein Properties Length: 606aa    MW: 67411.1 Da    PI: 7.3387
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022987658.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH20.58.3e-07315336526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                     lC  f  +G C++G++C+F+H+
  XP_022987658.1 315 LCFKFTSSGSCPRGEKCNFHHD 336
                     56666778*************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 606 aa     Download sequence    
MSPPRILLCG DVLGRLNQLY KRVVSVNKSA GPFDALLCVG QFFPDSTEQL DEFMDYVEGR  60
SVIPLSTYFI GDYGVGAAKV LLASSRDSGN QGFKMDGLKI CANLHWLKGS GKFTLQGLSL  120
AYLSGRRSSD GLQFGTYTQD DVDVLRAIAE EPGVIDLFLT NEWPTGVTNR AATLDIPPGV  180
SDPFGSDSTV SELVVEIKPR YHIAGTKGVF YAREPYSNVD AVHVTRFLGL GSVGNKEKQK  240
FIHAISPIPS STMSAAEISM KPPNTTLSPY TLTERKAEAS DSAKRSSNSV SESQYWRYDV  300
SQKRQKYGTA DGNKLCFKFT SSGSCPRGEK CNFHHDMDAR EQSQRGVCFD FLNKGKCERG  360
PDCSFKHSLQ NEVDSQSGKR RSGNAGTNRS KECWFCLSSP NIESHLIVSV GESFYCALAK  420
GHLVPDHILI VPVEHFPNTL SLGPEFETEI NRLQNCLRKY FKSQGKEVVF FEWVSKRSTH  480
ANLQAVPIPT SRAHVVQNIF DMAAEKLGFK FVASKSDAPG EGRKSLRTHF DSNRSFFYAE  540
LPECVTLSHV IEETEIFPAQ FGREVLAGLL NMADKADWRN CTHSKEEETK MAEEFKIRFE  600
NFDPNK