PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022987658.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C3H | ||||||||
Protein Properties | Length: 606aa MW: 67411.1 Da PI: 7.3387 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 20.5 | 8.3e-07 | 315 | 336 | 5 | 26 |
--SGGGGTS--TTTTT-SS-SS CS zf-CCCH 5 lCrffartGtCkyGdrCkFaHg 26 lC f +G C++G++C+F+H+ XP_022987658.1 315 LCFKFTSSGSCPRGEKCNFHHD 336 56666778*************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 606 aa Download sequence |
MSPPRILLCG DVLGRLNQLY KRVVSVNKSA GPFDALLCVG QFFPDSTEQL DEFMDYVEGR 60 SVIPLSTYFI GDYGVGAAKV LLASSRDSGN QGFKMDGLKI CANLHWLKGS GKFTLQGLSL 120 AYLSGRRSSD GLQFGTYTQD DVDVLRAIAE EPGVIDLFLT NEWPTGVTNR AATLDIPPGV 180 SDPFGSDSTV SELVVEIKPR YHIAGTKGVF YAREPYSNVD AVHVTRFLGL GSVGNKEKQK 240 FIHAISPIPS STMSAAEISM KPPNTTLSPY TLTERKAEAS DSAKRSSNSV SESQYWRYDV 300 SQKRQKYGTA DGNKLCFKFT SSGSCPRGEK CNFHHDMDAR EQSQRGVCFD FLNKGKCERG 360 PDCSFKHSLQ NEVDSQSGKR RSGNAGTNRS KECWFCLSSP NIESHLIVSV GESFYCALAK 420 GHLVPDHILI VPVEHFPNTL SLGPEFETEI NRLQNCLRKY FKSQGKEVVF FEWVSKRSTH 480 ANLQAVPIPT SRAHVVQNIF DMAAEKLGFK FVASKSDAPG EGRKSLRTHF DSNRSFFYAE 540 LPECVTLSHV IEETEIFPAQ FGREVLAGLL NMADKADWRN CTHSKEEETK MAEEFKIRFE 600 NFDPNK |