PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022987519.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 322aa MW: 36435.6 Da PI: 7.2821

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022987519.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.1	6.5e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l +++ +G+g +W + ++++g++R++k+c++rw++yl XP_022987519.1 14 KGPWSPEEDAKLRAYIEHYGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	39.1	1.7e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ ++ G++ W+ Ia+ ++ gRt++++k++w++ XP_022987519.1 69 GGFSEEEDNIISNLYISIGSR-WSVIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLRAYIE HYGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDNIIS NLYISIGSRW SVIAAQLPGR TDNDIKNYWN TRLKKKLLGK 120 RKQSNNNNGN SPSSSSNEDP KEGLSNSALE RLQLHMQLQG FQNPLSFYTH PQLWPKLHPV 180 QEKIVHTLLN NQSPNFLNPN LQASTTTQLP QGQPPTGEEF FIHPKPNPAS PDQASGYHQV 240 SNFMQVDELP DVKVDGFMAQ TGQMAEFDYF KEVGGSSKDS LIWWAQNNDH DMRSGSNSNS 300 WDSTSVLESE WVFQDFELGY NL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	4e-91	MYB family protein