PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022987516.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 468aa MW: 54164.5 Da PI: 6.2046

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022987516.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.6	5.7e-18	196	242	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd llv++v+q+G + W+ Ia+ ++ gR +kqc++rw+++l XP_022987516.1 196 KGQWTIEEDRLLVQLVEQYGVRKWSHIAQILP-GRIGKQCRERWHNHL 242 799***************************.***********97 PP
2	Myb_DNA-binding	54.2	3.3e-17	248	290	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++ W++eEd l++a+ + G++ W+ Ia++++ gRt++++k++w+ XP_022987516.1 248 KDTWSEEEDRVLIEAHSEIGNK-WAEIAKRLP-GRTENSIKNHWN 290 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence
MEFESSLRQN LSSQIQQVCS ENYAQICKND ELSFEIFASK GNYLQEFHNL DHFHPIGSSS 60 NHPVMEDENL CSFDPLNPYS YGCSSNNNMG VEDLYDFSKG CTTDQNGGCG QVMDNFQSCG 120 DYYYQRNQIE IMELERNSMI PLNFQEIKPV NFIVADEVSC VTSGHGHIQK AIMNKNATFP 180 SLLRTSKVRK KPTVIKGQWT IEEDRLLVQL VEQYGVRKWS HIAQILPGRI GKQCRERWHN 240 HLRPDIKKDT WSEEEDRVLI EAHSEIGNKW AEIAKRLPGR TENSIKNHWN ATKRRQYSKR 300 KCRSKYPRCS LLQDYIKSLN LDSVAARHQK KSSATSAVNN TKSKVADHHH HQTQTTEFCP 360 NDWTVPNFDF KDEPEIYLDD SFFPEGCSIN SLVEDIAGAY VDDANNYDRK RYNDNEESVE 420 FRRVEMERSQ YRAPVSTAGM VAGMEFEVKK ELDLVEMMIQ VNEVNNFK

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence

MEFESSLRQN LSSQIQQVCS ENYAQICKND ELSFEIFASK GNYLQEFHNL DHFHPIGSSS  60
NHPVMEDENL CSFDPLNPYS YGCSSNNNMG VEDLYDFSKG CTTDQNGGCG QVMDNFQSCG  120
DYYYQRNQIE IMELERNSMI PLNFQEIKPV NFIVADEVSC VTSGHGHIQK AIMNKNATFP  180
SLLRTSKVRK KPTVIKGQWT IEEDRLLVQL VEQYGVRKWS HIAQILPGRI GKQCRERWHN  240
HLRPDIKKDT WSEEEDRVLI EAHSEIGNKW AEIAKRLPGR TENSIKNHWN ATKRRQYSKR  300
KCRSKYPRCS LLQDYIKSLN LDSVAARHQK KSSATSAVNN TKSKVADHHH HQTQTTEFCP  360
NDWTVPNFDF KDEPEIYLDD SFFPEGCSIN SLVEDIAGAY VDDANNYDRK RYNDNEESVE  420
FRRVEMERSQ YRAPVSTAGM VAGMEFEVKK ELDLVEMMIQ VNEVNNFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18770.1	1e-100	MYB family protein