PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022987452.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | ERF | ||||||||
Protein Properties | Length: 203aa MW: 22092.3 Da PI: 4.5778 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.4 | 1.5e-17 | 20 | 70 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+ykGVr++k +g+Wv+eIr p++ r r++lg++++ae+Aa+a +a +l+g XP_022987452.1 20 SRYKGVRRRK-WGKWVSEIRLPNS---RERIWLGSYDSAEKAARAFDAGLFCLRG 70 79*****998.**********933...5*********************999998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
MTKPSSPSTA AAAAVDSPDS RYKGVRRRKW GKWVSEIRLP NSRERIWLGS YDSAEKAARA 60 FDAGLFCLRG RTARFNFPNN PPEIAGASLL SRAEIQSVAA QFANSNPPPP PSSECTQPTI 120 GSPSPSPSPS VVSEATTAVI EERSTFLDLS TAMGSGNYGS EFGLFPEYNP FFNDLMNTTN 180 SGAPFFDYGD ENLDDQDSFL WNF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 23 | 29 | KGVRRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19210.1 | 2e-53 | ERF family protein |