PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022987343.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 167aa MW: 19146.9 Da PI: 10.0912 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.9 | 8.4e-19 | 38 | 92 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++++eql+ Lee F+ + +++ +++ LA++l+L+ rqV vWFqNrRa+ k XP_022987343.1 38 RKKLRLSQEQLTLLEETFKLHTTLNLAQKLALADQLNLKSRQVEVWFQNRRARSK 92 788899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 110.5 | 1.1e-35 | 38 | 126 | 1 | 89 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 +kk+rls+eq++lLEe+F+ +++L+ +K +la +L+l+ rqv+vWFqnrRAR k+kq+E+d+e+Lk+ +++lkeen rL+ke +eLr+ XP_022987343.1 38 RKKLRLSQEQLTLLEETFKLHTTLNLAQKLALADQLNLKSRQVEVWFQNRRARSKLKQTEVDCEFLKKYCERLKEENGRLKKELQELRS 126 69*************************************************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 167 aa Download sequence |
MQLQANEPSK DSSFGITRDR SSTNYNCNAI SGGLERDRKK LRLSQEQLTL LEETFKLHTT 60 LNLAQKLALA DQLNLKSRQV EVWFQNRRAR SKLKQTEVDC EFLKKYCERL KEENGRLKKE 120 LQELRSRKIG ASQLYIQLPK AATLTICPSC DKTTRPVAAV EAHSPPQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 36 | 42 | RDRKKLR |
2 | 87 | 95 | RRARSKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47370.1 | 2e-44 | HD-ZIP family protein |