PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022987112.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

SBP

Protein Properties

Length: 550aa MW: 60280.4 Da PI: 7.795

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022987112.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	134.4	3.5e-42	175	251	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 Cqv gC++dls+ k+yh+rhkvCevhsk+++v+v+g+eqrfCqqCsrfh l efD++krsCr+rLa+hnerrrk+q XP_022987112.1 175 CQVYGCNKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQV 251 **************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 550 aa Download sequence
MESWSYVSEG KGCMSDEMNS PTSSLARNKD SLLGWEFKNP CNFGSTMLPT AQHVENQGFG 60 EFIFPEMIGK QLADNSVCDI LSSKVVGGRY LNPAMNSSNA YLGEDESTSK LSGSVVDSTS 120 RDSSFIDLKL GRFADHREAH GYKFFKGAPI LASSESSMPT KRVRASGLNS QTYFCQVYGC 180 NKDLSSSKDY HKRHKVCEVH SKTAKVIVNG IEQRFCQQCS RFHLLAEFDD GKRSCRKRLA 240 GHNERRRKPQ VAINSGRAGR FLQSYNGSRL QGTALTATSF ICQGILPNGI LNPEKYGASD 300 WCRTVKIEDK NEYMPLSAVH APSAHLHSKS LFSPYDIDAQ VPPFHDNEPN PSATNMFKEN 360 SNQYPLIAGG VNSSPRSYFH NPSLGSEYFS VYSAASTDRL SGLSDSGCAL SLLSSQTRNS 420 STHSSGIPIG RPMVLLDGQN HYSMSQLSEK LMGVSSQVSV NGVSNKFNSS GLNASEGCTL 480 GPISTPETSD AVNLEITNRI FHESNLADPC EGGPTIDLLQ LSSQLHRVEH QRQAMQVKQE 540 SNAFCCLRIT

Sequence ? help Back to Top

Protein Sequence Length: 550 aa Download sequence

MESWSYVSEG KGCMSDEMNS PTSSLARNKD SLLGWEFKNP CNFGSTMLPT AQHVENQGFG  60
EFIFPEMIGK QLADNSVCDI LSSKVVGGRY LNPAMNSSNA YLGEDESTSK LSGSVVDSTS  120
RDSSFIDLKL GRFADHREAH GYKFFKGAPI LASSESSMPT KRVRASGLNS QTYFCQVYGC  180
NKDLSSSKDY HKRHKVCEVH SKTAKVIVNG IEQRFCQQCS RFHLLAEFDD GKRSCRKRLA  240
GHNERRRKPQ VAINSGRAGR FLQSYNGSRL QGTALTATSF ICQGILPNGI LNPEKYGASD  300
WCRTVKIEDK NEYMPLSAVH APSAHLHSKS LFSPYDIDAQ VPPFHDNEPN PSATNMFKEN  360
SNQYPLIAGG VNSSPRSYFH NPSLGSEYFS VYSAASTDRL SGLSDSGCAL SLLSSQTRNS  420
STHSSGIPIG RPMVLLDGQN HYSMSQLSEK LMGVSSQVSV NGVSNKFNSS GLNASEGCTL  480
GPISTPETSD AVNLEITNRI FHESNLADPC EGGPTIDLLQ LSSQLHRVEH QRQAMQVKQE  540
SNAFCCLRIT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	8e-49	SBP family protein