PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022986918.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 272aa    MW: 31663.4 Da    PI: 7.458
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022986918.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.79.7e-172067148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT++Ed +l++ v ++G ++W+ Ia+  g++Rt+k+c++rw +yl
   XP_022986918.1 20 KGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYL 67
                     79********************************************97 PP
2Myb_DNA-binding54.62.4e-1773118148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T++E+ l +++++++G++ W++Iar+++ gRt++++k++w++++
   XP_022986918.1  73 RGKMTAQEERLVLELHNKWGNR-WSKIARKLP-GRTDNEIKNYWRTHM 118
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MSWWERRKEQ KMVEGQEIRK GPWTEQEDIQ LICFVGLFGD RRWDFIAKVS GLNRTGKSCR  60
LRWVNYLHPG LKRGKMTAQE ERLVLELHNK WGNRWSKIAR KLPGRTDNEI KNYWRTHMRK  120
KAQEKRRALS SSSSSSSSYS SNNPAVEFPA DTGPVKFFDS GGSEISASSP STKKKMVENQ  180
ELGDPNGFSM DDIWKDIDLS DHESLTMNQD VYSEEDCNNF SCPALTSPTP WDYYCGDSMW  240
RMEEEEESKL IFSGYDHNGR PRLAQPNQIF FY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46130.19e-79MYB family protein