PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022986717.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

AP2

Protein Properties

Length: 473aa MW: 51482.2 Da PI: 7.8098

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022986717.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.7	5.2e-17	155	204	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_022986717.1 155 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHSAARAYDRAAIKFRG 204 78*****************......55**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
MFDLNLNVDS PDATPNEDSV LFFEKLPQGS GNQMDESGTS NSSIVNADTS SNGGDDDSCS 60 TRAGGELFMI NFGILKSGSA NDVVTKELFP IGGTVNPDFG ILQGHNSACS SNSSRKNWIN 120 LAFDRSGSAG EGRMMQPVQP QPAKKSRRGP RSRSSQYRGV TFYRRTGRWE SHIWDCGKQV 180 YLGGFDTAHS AARAYDRAAI KFRGVDADIN FILSDYEEDL KQMKNLSKEE FVHILRRQST 240 GFSRGSSKYR GVTLHKCGRW EARMGQLLGK KAYDKAAIQC NGREAVTNFE PSTYGERVSE 300 GSSEGCRIML DLNLGISPLS LDNYPKDNEG HLRFQSGPCY ANDRSTMIES NADAAVGDPS 360 LKGPVMATGH VPLWNGLQHS CLLPSEERVT DKRHALGSSQ GVVPNWAWQI HNQVNATQLP 420 LFSAAASSGF SFSAIPAAIL PPRQPGSTAH NLHFTSAKAS LNSPQLNPQQ PPP

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

MFDLNLNVDS PDATPNEDSV LFFEKLPQGS GNQMDESGTS NSSIVNADTS SNGGDDDSCS  60
TRAGGELFMI NFGILKSGSA NDVVTKELFP IGGTVNPDFG ILQGHNSACS SNSSRKNWIN  120
LAFDRSGSAG EGRMMQPVQP QPAKKSRRGP RSRSSQYRGV TFYRRTGRWE SHIWDCGKQV  180
YLGGFDTAHS AARAYDRAAI KFRGVDADIN FILSDYEEDL KQMKNLSKEE FVHILRRQST  240
GFSRGSSKYR GVTLHKCGRW EARMGQLLGK KAYDKAAIQC NGREAVTNFE PSTYGERVSE  300
GSSEGCRIML DLNLGISPLS LDNYPKDNEG HLRFQSGPCY ANDRSTMIES NADAAVGDPS  360
LKGPVMATGH VPLWNGLQHS CLLPSEERVT DKRHALGSSQ GVVPNWAWQI HNQVNATQLP  420
LFSAAASSGF SFSAIPAAIL PPRQPGSTAH NLHFTSAKAS LNSPQLNPQQ PPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.1	1e-125	AP2 family protein