PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022986704.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NF-YA | ||||||||
Protein Properties | Length: 343aa MW: 37182.5 Da PI: 7.1682 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 102.5 | 4.1e-32 | 168 | 224 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep++VNaKQyq+Il+RRq+Rak+e e+kl +k rkpylheSRh+hA+rR+RgsgGrF XP_022986704.1 168 QEPVFVNAKQYQGILRRRQARAKAEVENKL-IKIRKPYLHESRHQHAMRRARGSGGRF 224 69****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 343 aa Download sequence |
MQSKPRSVNQ LESEPPNMQQ TSSYSEPWWR SIGYNHISSP AAGGNLSNST SLECPNGASE 60 SNDGPSMSND DLNEDDDDDT TKDSHAVSYG QVQNNCQHAV SAAPTVHGGC ITQPPQLELV 120 GHSIACASNL YQDPYYAGVM AAYGHQPGYP PFLGMPHARM ALPLEVTQEP VFVNAKQYQG 180 ILRRRQARAK AEVENKLIKI RKPYLHESRH QHAMRRARGS GGRFAKKNEV NSSSSTVKNK 240 DSGSGQAFSS HSAGSSGSEA APCALAETWN SSNGQQEART QLHEAYEARS YVNGSGQFHN 300 YSSFQASSYA LRSGERGDDG DCSGQQRGSI SENQAAQRRL AIK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12840.2 | 4e-73 | NF-YA family protein |