PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022986646.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 103aa MW: 11457.7 Da PI: 7.0904 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 21.8 | 4.4e-07 | 12 | 56 | 3 | 44 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 +WT+ E + + +a + + ++ +W +a+ +g g+t+ ++k ++ XP_022986646.1 12 SWTPKENKAFERALAVFDKDtpdRWLNVAKAVGGGKTPDEVKTHF 56 7******************************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 103 aa Download sequence |
MASMSSSHHS SSWTPKENKA FERALAVFDK DTPDRWLNVA KAVGGGKTPD EVKTHFDLLV 60 EDVKHIEFGH VPFPNYSSTA SATGTSNANI NDQEQRMRNL KLQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G39250.1 | 2e-31 | MYB_related family protein |